Details
| Original language | English |
|---|---|
| Pages (from-to) | 1573-1583 |
| Number of pages | 11 |
| Journal | Archives of virology |
| Volume | 147 |
| Issue number | 8 |
| Publication status | Published - 11 Apr 2014 |
Abstract
The complete nucleotide sequence of Cocksfoot streak virus (CSV) has been determined. The viral genome comprises 9663 nucleotides, excluding a 3′-terminal poly(A) sequence. The genome of CSV has a 133 nt 5′-non coding and a 260 nt 3′-non coding region. The RNA of CSV encodes a single polyprotein of 3089 amino acid residues and has a deduced genome organization typical for a member of the family Potyviridae. CSV is transmissible by aphids and has a narrow host range in the Gramineae. It was compared to two potyviruses having monocotyledonous hosts (monocot potyviruses) and several potyviruses infecting dicotyledonous plants (dicot potyviruses). CSV is most closely related to other monocot potyviruses like Maize dwarf mosaic virus (MDMV) and Johnson grass mosaic virus (JGMV), but also closely related to the dicot potyviruses. On the other hand, CSV is less related to monocot viruses from the other genera (Rymovirus, Tritimovirus) within the Potyviridae. Specific motifs, described for potyviral polyproteins, are also present in the polyprotein of CSV. Only two motifs in the HC-Pro - motif involved in long distance movement and motif for HC-Pro self-interaction - were different in comparison to most of the dicot potyviruses.
ASJC Scopus subject areas
- Immunology and Microbiology(all)
- Virology
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In: Archives of virology, Vol. 147, No. 8, 11.04.2014, p. 1573-1583.
Research output: Contribution to journal › Article › Research › peer review
}
TY - JOUR
T1 - The complete sequence of the genome of Cocksfoot streak virus (CSV), a grass infecting Potyvirus
AU - Götz, R.
AU - Maiss, E.
PY - 2014/4/11
Y1 - 2014/4/11
N2 - The complete nucleotide sequence of Cocksfoot streak virus (CSV) has been determined. The viral genome comprises 9663 nucleotides, excluding a 3′-terminal poly(A) sequence. The genome of CSV has a 133 nt 5′-non coding and a 260 nt 3′-non coding region. The RNA of CSV encodes a single polyprotein of 3089 amino acid residues and has a deduced genome organization typical for a member of the family Potyviridae. CSV is transmissible by aphids and has a narrow host range in the Gramineae. It was compared to two potyviruses having monocotyledonous hosts (monocot potyviruses) and several potyviruses infecting dicotyledonous plants (dicot potyviruses). CSV is most closely related to other monocot potyviruses like Maize dwarf mosaic virus (MDMV) and Johnson grass mosaic virus (JGMV), but also closely related to the dicot potyviruses. On the other hand, CSV is less related to monocot viruses from the other genera (Rymovirus, Tritimovirus) within the Potyviridae. Specific motifs, described for potyviral polyproteins, are also present in the polyprotein of CSV. Only two motifs in the HC-Pro - motif involved in long distance movement and motif for HC-Pro self-interaction - were different in comparison to most of the dicot potyviruses.
AB - The complete nucleotide sequence of Cocksfoot streak virus (CSV) has been determined. The viral genome comprises 9663 nucleotides, excluding a 3′-terminal poly(A) sequence. The genome of CSV has a 133 nt 5′-non coding and a 260 nt 3′-non coding region. The RNA of CSV encodes a single polyprotein of 3089 amino acid residues and has a deduced genome organization typical for a member of the family Potyviridae. CSV is transmissible by aphids and has a narrow host range in the Gramineae. It was compared to two potyviruses having monocotyledonous hosts (monocot potyviruses) and several potyviruses infecting dicotyledonous plants (dicot potyviruses). CSV is most closely related to other monocot potyviruses like Maize dwarf mosaic virus (MDMV) and Johnson grass mosaic virus (JGMV), but also closely related to the dicot potyviruses. On the other hand, CSV is less related to monocot viruses from the other genera (Rymovirus, Tritimovirus) within the Potyviridae. Specific motifs, described for potyviral polyproteins, are also present in the polyprotein of CSV. Only two motifs in the HC-Pro - motif involved in long distance movement and motif for HC-Pro self-interaction - were different in comparison to most of the dicot potyviruses.
UR - http://www.scopus.com/inward/record.url?scp=0035984629&partnerID=8YFLogxK
U2 - 10.1007/s00705-002-0820-8
DO - 10.1007/s00705-002-0820-8
M3 - Article
C2 - 12181676
AN - SCOPUS:0035984629
VL - 147
SP - 1573
EP - 1583
JO - Archives of virology
JF - Archives of virology
SN - 0304-8608
IS - 8
ER -