PspF-binding domain PspA1-144 and the PspA·F complex: New insights into the coiled-coil-dependent regulation of AAA+ proteins

Research output: Contribution to journalArticleResearchpeer review

Authors

  • Hendrik Osadnik
  • Michael Schöpfel
  • Eyleen Heidrich
  • Denise Mehner
  • Hauke Lilie
  • Christoph Parthier
  • H. Jelger Risselada
  • Helmut Grubmüller
  • Milton T. Stubbs
  • Thomas Brüser

Research Organisations

External Research Organisations

  • University of California at San Francisco
  • Martin Luther University Halle-Wittenberg
  • Max Planck Institute for Biophysical Chemistry (Karl Friedrich Bonhoeffer Institute)
  • Leibniz Institute of Surface Engineering (IOM)
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Details

Original languageEnglish
Pages (from-to)743-759
Number of pages17
JournalMolecular Microbiology
Volume98
Issue number4
Publication statusPublished - Nov 2015

Abstract

Phage shock protein A (PspA) belongs to the highy conserved PspA/IM30 family and is a key component of the stress inducible Psp system in Escherichia coli. One of its central roles is the regulatory interaction with the transcriptional activator of this system, the σ54 enhancer-binding protein PspF, a member of the AAA+ protein family. The PspA/F regulatory system has been intensively studied and serves as a paradigm for AAA+ enzyme regulation by trans-acting factors. However, the molecular mechanism of how exactly PspA controls the activity of PspF and hence σ54-dependent expression of the psp genes is still unclear. To approach this question, we identified the minimal PspF-interacting domain of PspA, solved its structure, determined its affinity to PspF and the dissociation kinetics, identified residues that are potentially important for PspF regulation and analyzed effects of their mutation on PspFin vivo and in vitro. Our data indicate that several characteristics of AAA+ regulation in the PspA·F complex resemble those of the AAA+ unfoldase ClpB, with both proteins being regulated by a structurally highly conserved coiled-coil domain. The convergent evolution of both regulatory domains points to a general mechanism to control AAA+ activity for divergent physiologic tasks via coiled-coil domains. PspA is the regulator of the AAA+ protein PspF, the transcriptional activator of the psp system in Escherichia coli. The crystal structure of the PspF-binding domain of PspA indicates a conserved architecture of PspA-like proteins, and data from mutational analyses suggest that PspF regulation might be more complex than previously thought. Similarities to the M-domain of the AAA+ disaggregase ClpB point to convergently evolved characteristics in AAA+ regulation.

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Cite this

PspF-binding domain PspA1-144 and the PspA·F complex: New insights into the coiled-coil-dependent regulation of AAA+ proteins. / Osadnik, Hendrik; Schöpfel, Michael; Heidrich, Eyleen et al.
In: Molecular Microbiology, Vol. 98, No. 4, 11.2015, p. 743-759.

Research output: Contribution to journalArticleResearchpeer review

Osadnik, H, Schöpfel, M, Heidrich, E, Mehner, D, Lilie, H, Parthier, C, Risselada, HJ, Grubmüller, H, Stubbs, MT & Brüser, T 2015, 'PspF-binding domain PspA1-144 and the PspA·F complex: New insights into the coiled-coil-dependent regulation of AAA+ proteins', Molecular Microbiology, vol. 98, no. 4, pp. 743-759. https://doi.org/10.1111/mmi.13154
Osadnik, H., Schöpfel, M., Heidrich, E., Mehner, D., Lilie, H., Parthier, C., Risselada, H. J., Grubmüller, H., Stubbs, M. T., & Brüser, T. (2015). PspF-binding domain PspA1-144 and the PspA·F complex: New insights into the coiled-coil-dependent regulation of AAA+ proteins. Molecular Microbiology, 98(4), 743-759. https://doi.org/10.1111/mmi.13154
Osadnik H, Schöpfel M, Heidrich E, Mehner D, Lilie H, Parthier C et al. PspF-binding domain PspA1-144 and the PspA·F complex: New insights into the coiled-coil-dependent regulation of AAA+ proteins. Molecular Microbiology. 2015 Nov;98(4):743-759. doi: 10.1111/mmi.13154
Osadnik, Hendrik ; Schöpfel, Michael ; Heidrich, Eyleen et al. / PspF-binding domain PspA1-144 and the PspA·F complex : New insights into the coiled-coil-dependent regulation of AAA+ proteins. In: Molecular Microbiology. 2015 ; Vol. 98, No. 4. pp. 743-759.
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abstract = "Phage shock protein A (PspA) belongs to the highy conserved PspA/IM30 family and is a key component of the stress inducible Psp system in Escherichia coli. One of its central roles is the regulatory interaction with the transcriptional activator of this system, the σ54 enhancer-binding protein PspF, a member of the AAA+ protein family. The PspA/F regulatory system has been intensively studied and serves as a paradigm for AAA+ enzyme regulation by trans-acting factors. However, the molecular mechanism of how exactly PspA controls the activity of PspF and hence σ54-dependent expression of the psp genes is still unclear. To approach this question, we identified the minimal PspF-interacting domain of PspA, solved its structure, determined its affinity to PspF and the dissociation kinetics, identified residues that are potentially important for PspF regulation and analyzed effects of their mutation on PspFin vivo and in vitro. Our data indicate that several characteristics of AAA+ regulation in the PspA·F complex resemble those of the AAA+ unfoldase ClpB, with both proteins being regulated by a structurally highly conserved coiled-coil domain. The convergent evolution of both regulatory domains points to a general mechanism to control AAA+ activity for divergent physiologic tasks via coiled-coil domains. PspA is the regulator of the AAA+ protein PspF, the transcriptional activator of the psp system in Escherichia coli. The crystal structure of the PspF-binding domain of PspA indicates a conserved architecture of PspA-like proteins, and data from mutational analyses suggest that PspF regulation might be more complex than previously thought. Similarities to the M-domain of the AAA+ disaggregase ClpB point to convergently evolved characteristics in AAA+ regulation.",
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T1 - PspF-binding domain PspA1-144 and the PspA·F complex

T2 - New insights into the coiled-coil-dependent regulation of AAA+ proteins

AU - Osadnik, Hendrik

AU - Schöpfel, Michael

AU - Heidrich, Eyleen

AU - Mehner, Denise

AU - Lilie, Hauke

AU - Parthier, Christoph

AU - Risselada, H. Jelger

AU - Grubmüller, Helmut

AU - Stubbs, Milton T.

AU - Brüser, Thomas

N1 - Publisher Copyright: © 2015 John Wiley & Sons Ltd. Copyright: Copyright 2015 Elsevier B.V., All rights reserved.

PY - 2015/11

Y1 - 2015/11

N2 - Phage shock protein A (PspA) belongs to the highy conserved PspA/IM30 family and is a key component of the stress inducible Psp system in Escherichia coli. One of its central roles is the regulatory interaction with the transcriptional activator of this system, the σ54 enhancer-binding protein PspF, a member of the AAA+ protein family. The PspA/F regulatory system has been intensively studied and serves as a paradigm for AAA+ enzyme regulation by trans-acting factors. However, the molecular mechanism of how exactly PspA controls the activity of PspF and hence σ54-dependent expression of the psp genes is still unclear. To approach this question, we identified the minimal PspF-interacting domain of PspA, solved its structure, determined its affinity to PspF and the dissociation kinetics, identified residues that are potentially important for PspF regulation and analyzed effects of their mutation on PspFin vivo and in vitro. Our data indicate that several characteristics of AAA+ regulation in the PspA·F complex resemble those of the AAA+ unfoldase ClpB, with both proteins being regulated by a structurally highly conserved coiled-coil domain. The convergent evolution of both regulatory domains points to a general mechanism to control AAA+ activity for divergent physiologic tasks via coiled-coil domains. PspA is the regulator of the AAA+ protein PspF, the transcriptional activator of the psp system in Escherichia coli. The crystal structure of the PspF-binding domain of PspA indicates a conserved architecture of PspA-like proteins, and data from mutational analyses suggest that PspF regulation might be more complex than previously thought. Similarities to the M-domain of the AAA+ disaggregase ClpB point to convergently evolved characteristics in AAA+ regulation.

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