Nucleotide second messenger-mediated regulation of a muralytic enzyme in Streptomyces

Research output: Contribution to journalArticleResearchpeer review

Authors

  • Renée J St-Onge
  • Henry J Haiser
  • Mary R Yousef
  • Emma Sherwood
  • Natalia Tschowri
  • Mahmoud Al-Bassam
  • Marie A Elliot

External Research Organisations

  • McMaster University
  • John Innes Centre
  • Norwich Community Hospital
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Details

Original languageEnglish
Pages (from-to)779-795
Number of pages17
JournalMolecular microbiology
Volume96
Issue number4
Publication statusPublished - 1 May 2015
Externally publishedYes

Abstract

Peptidoglycan degradative enzymes have important roles at many stages during the bacterial life cycle, and it is critical that these enzymes be stringently regulated to avoid compromising the integrity of the cell wall. How this regulation is exerted is of considerable interest: promoter-based control and protein-protein interactions are known to be employed; however, other regulatory mechanisms are almost certainly involved. In the actinobacteria, a class of muralytic enzymes - the 'resuscitation-promoting factors' (Rpfs) - orchestrates the resuscitation of dormant cells. In this study, we have taken a holistic approach to exploring the mechanisms governing RpfA function using the model bacterium Streptomyces coelicolor and have uncovered unprecedented multilevel regulation that is coordinated by three second messengers. Our studies show that RpfA is subject to transcriptional control by the cyclic AMP receptor protein, riboswitch-mediated transcription attenuation in response to cyclic di-AMP, and growth stage-dependent proteolysis in response to ppGpp accumulation. Furthermore, our results suggest that these control mechanisms are likely applicable to cell wall lytic enzymes in other bacteria. Streptomyces bacteria have an unusual life cycle, which culminates in the development of dormant spores. Spore germination and outgrowth require the activity of dedicated cell wall-degrading enzymes, the regulation of which is poorly understood. Here, we have uncovered an intricate, multi-level regulatory network orchestrated by three different signaling molecules.

Keywords

    Aconitate Hydratase/genetics, Bacterial Proteins/genetics, Cell Wall/metabolism, Cyclic AMP/metabolism, Cyclic AMP Receptor Protein/genetics, Gene Expression Regulation, Bacterial, Guanine Nucleotides/metabolism, Mutation, Peptidoglycan/metabolism, Promoter Regions, Genetic, Riboswitch/genetics, Second Messenger Systems, Streptomyces coelicolor/enzymology

ASJC Scopus subject areas

Cite this

Nucleotide second messenger-mediated regulation of a muralytic enzyme in Streptomyces. / St-Onge, Renée J; Haiser, Henry J; Yousef, Mary R et al.
In: Molecular microbiology, Vol. 96, No. 4, 01.05.2015, p. 779-795.

Research output: Contribution to journalArticleResearchpeer review

St-Onge, RJ, Haiser, HJ, Yousef, MR, Sherwood, E, Tschowri, N, Al-Bassam, M & Elliot, MA 2015, 'Nucleotide second messenger-mediated regulation of a muralytic enzyme in Streptomyces', Molecular microbiology, vol. 96, no. 4, pp. 779-795. https://doi.org/10.1111/mmi.12971
St-Onge, R. J., Haiser, H. J., Yousef, M. R., Sherwood, E., Tschowri, N., Al-Bassam, M., & Elliot, M. A. (2015). Nucleotide second messenger-mediated regulation of a muralytic enzyme in Streptomyces. Molecular microbiology, 96(4), 779-795. https://doi.org/10.1111/mmi.12971
St-Onge RJ, Haiser HJ, Yousef MR, Sherwood E, Tschowri N, Al-Bassam M et al. Nucleotide second messenger-mediated regulation of a muralytic enzyme in Streptomyces. Molecular microbiology. 2015 May 1;96(4):779-795. doi: 10.1111/mmi.12971
St-Onge, Renée J ; Haiser, Henry J ; Yousef, Mary R et al. / Nucleotide second messenger-mediated regulation of a muralytic enzyme in Streptomyces. In: Molecular microbiology. 2015 ; Vol. 96, No. 4. pp. 779-795.
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abstract = "Peptidoglycan degradative enzymes have important roles at many stages during the bacterial life cycle, and it is critical that these enzymes be stringently regulated to avoid compromising the integrity of the cell wall. How this regulation is exerted is of considerable interest: promoter-based control and protein-protein interactions are known to be employed; however, other regulatory mechanisms are almost certainly involved. In the actinobacteria, a class of muralytic enzymes - the 'resuscitation-promoting factors' (Rpfs) - orchestrates the resuscitation of dormant cells. In this study, we have taken a holistic approach to exploring the mechanisms governing RpfA function using the model bacterium Streptomyces coelicolor and have uncovered unprecedented multilevel regulation that is coordinated by three second messengers. Our studies show that RpfA is subject to transcriptional control by the cyclic AMP receptor protein, riboswitch-mediated transcription attenuation in response to cyclic di-AMP, and growth stage-dependent proteolysis in response to ppGpp accumulation. Furthermore, our results suggest that these control mechanisms are likely applicable to cell wall lytic enzymes in other bacteria. Streptomyces bacteria have an unusual life cycle, which culminates in the development of dormant spores. Spore germination and outgrowth require the activity of dedicated cell wall-degrading enzymes, the regulation of which is poorly understood. Here, we have uncovered an intricate, multi-level regulatory network orchestrated by three different signaling molecules.",
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T1 - Nucleotide second messenger-mediated regulation of a muralytic enzyme in Streptomyces

AU - St-Onge, Renée J

AU - Haiser, Henry J

AU - Yousef, Mary R

AU - Sherwood, Emma

AU - Tschowri, Natalia

AU - Al-Bassam, Mahmoud

AU - Elliot, Marie A

N1 - Publisher Copyright: © 2015 John Wiley & Sons Ltd. Copyright: Copyright 2015 Elsevier B.V., All rights reserved.

PY - 2015/5/1

Y1 - 2015/5/1

N2 - Peptidoglycan degradative enzymes have important roles at many stages during the bacterial life cycle, and it is critical that these enzymes be stringently regulated to avoid compromising the integrity of the cell wall. How this regulation is exerted is of considerable interest: promoter-based control and protein-protein interactions are known to be employed; however, other regulatory mechanisms are almost certainly involved. In the actinobacteria, a class of muralytic enzymes - the 'resuscitation-promoting factors' (Rpfs) - orchestrates the resuscitation of dormant cells. In this study, we have taken a holistic approach to exploring the mechanisms governing RpfA function using the model bacterium Streptomyces coelicolor and have uncovered unprecedented multilevel regulation that is coordinated by three second messengers. Our studies show that RpfA is subject to transcriptional control by the cyclic AMP receptor protein, riboswitch-mediated transcription attenuation in response to cyclic di-AMP, and growth stage-dependent proteolysis in response to ppGpp accumulation. Furthermore, our results suggest that these control mechanisms are likely applicable to cell wall lytic enzymes in other bacteria. Streptomyces bacteria have an unusual life cycle, which culminates in the development of dormant spores. Spore germination and outgrowth require the activity of dedicated cell wall-degrading enzymes, the regulation of which is poorly understood. Here, we have uncovered an intricate, multi-level regulatory network orchestrated by three different signaling molecules.

AB - Peptidoglycan degradative enzymes have important roles at many stages during the bacterial life cycle, and it is critical that these enzymes be stringently regulated to avoid compromising the integrity of the cell wall. How this regulation is exerted is of considerable interest: promoter-based control and protein-protein interactions are known to be employed; however, other regulatory mechanisms are almost certainly involved. In the actinobacteria, a class of muralytic enzymes - the 'resuscitation-promoting factors' (Rpfs) - orchestrates the resuscitation of dormant cells. In this study, we have taken a holistic approach to exploring the mechanisms governing RpfA function using the model bacterium Streptomyces coelicolor and have uncovered unprecedented multilevel regulation that is coordinated by three second messengers. Our studies show that RpfA is subject to transcriptional control by the cyclic AMP receptor protein, riboswitch-mediated transcription attenuation in response to cyclic di-AMP, and growth stage-dependent proteolysis in response to ppGpp accumulation. Furthermore, our results suggest that these control mechanisms are likely applicable to cell wall lytic enzymes in other bacteria. Streptomyces bacteria have an unusual life cycle, which culminates in the development of dormant spores. Spore germination and outgrowth require the activity of dedicated cell wall-degrading enzymes, the regulation of which is poorly understood. Here, we have uncovered an intricate, multi-level regulatory network orchestrated by three different signaling molecules.

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KW - Bacterial Proteins/genetics

KW - Cell Wall/metabolism

KW - Cyclic AMP/metabolism

KW - Cyclic AMP Receptor Protein/genetics

KW - Gene Expression Regulation, Bacterial

KW - Guanine Nucleotides/metabolism

KW - Mutation

KW - Peptidoglycan/metabolism

KW - Promoter Regions, Genetic

KW - Riboswitch/genetics

KW - Second Messenger Systems

KW - Streptomyces coelicolor/enzymology

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DO - 10.1111/mmi.12971

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VL - 96

SP - 779

EP - 795

JO - Molecular microbiology

JF - Molecular microbiology

SN - 0950-382X

IS - 4

ER -

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