Monokaryotic Pleurotus sapidus Strains with Intraspecific Variability of an Alkene Cleaving DyP-Type Peroxidase Activity as a Result of Gene Mutation and Differential Gene Expression

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Authors

  • Nina Katharina Krahe
  • Ralf G. Berger
  • Martin Witt
  • Holger Zorn
  • Alejandra B. Omarini
  • Franziska Ersoy

External Research Organisations

  • Justus Liebig University Giessen
  • CONICET
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Details

Original languageEnglish
Article number1363
Number of pages24
JournalInternational Journal of Molecular Sciences
Volume22
Issue number3
Publication statusPublished - 29 Jan 2021

Abstract

The basidiomycete Pleurotus sapidus produced a dye-decolorizing peroxidase (PsaPOX) with alkene cleavage activity, implying potential as a biocatalyst for the fragrance and flavor industry. To increase the activity, a daughter-generation of 101 basidiospore-derived monokaryons (MK) was used. After a pre-selection according to the growth rate, the activity analysis revealed a stable intraspecific variability of the strains regarding peroxidase and alkene cleavage activity of PsaPOX. Ten monokaryons reached activities up to 2.6-fold higher than the dikaryon, with MK16 showing the highest activity. Analysis of the PsaPOX gene identified three different enzyme variants. These were co-responsible for the observed differences in activities between strains as verified by heterologous expression in Komagataella phaffii. The mutation S371H in enzyme variant PsaPOX_high caused an activity increase alongside a higher protein stability, while the eleven mutations in variant PsaPOX_low resulted in an activity decrease, which was partially based on a shift of the pH optimum from 3.5 to 3.0. Transcriptional analysis revealed the increased expression of PsaPOX in MK16 as reason for the higher PsaPOX activity in comparison to other strains producing the same PsaPOX variant. Thus, different expression profiles, as well as enzyme variants, were identified as crucial factors for the intraspecific variability of the PsaPOX activity in the monokaryons.

Keywords

    Alkene cleavage, Basidiomycota, Biocatalysis, Dikaryon, Dye-decolorizing peroxidase (DyP), Gene expression, Gene mutation, Intraspecific variability, Monokaryon, Pleurotus sapidus

ASJC Scopus subject areas

Cite this

Monokaryotic Pleurotus sapidus Strains with Intraspecific Variability of an Alkene Cleaving DyP-Type Peroxidase Activity as a Result of Gene Mutation and Differential Gene Expression. / Krahe, Nina Katharina; Berger, Ralf G.; Witt, Martin et al.
In: International Journal of Molecular Sciences, Vol. 22, No. 3, 1363, 29.01.2021.

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title = "Monokaryotic Pleurotus sapidus Strains with Intraspecific Variability of an Alkene Cleaving DyP-Type Peroxidase Activity as a Result of Gene Mutation and Differential Gene Expression",
abstract = "The basidiomycete Pleurotus sapidus produced a dye-decolorizing peroxidase (PsaPOX) with alkene cleavage activity, implying potential as a biocatalyst for the fragrance and flavor industry. To increase the activity, a daughter-generation of 101 basidiospore-derived monokaryons (MK) was used. After a pre-selection according to the growth rate, the activity analysis revealed a stable intraspecific variability of the strains regarding peroxidase and alkene cleavage activity of PsaPOX. Ten monokaryons reached activities up to 2.6-fold higher than the dikaryon, with MK16 showing the highest activity. Analysis of the PsaPOX gene identified three different enzyme variants. These were co-responsible for the observed differences in activities between strains as verified by heterologous expression in Komagataella phaffii. The mutation S371H in enzyme variant PsaPOX_high caused an activity increase alongside a higher protein stability, while the eleven mutations in variant PsaPOX_low resulted in an activity decrease, which was partially based on a shift of the pH optimum from 3.5 to 3.0. Transcriptional analysis revealed the increased expression of PsaPOX in MK16 as reason for the higher PsaPOX activity in comparison to other strains producing the same PsaPOX variant. Thus, different expression profiles, as well as enzyme variants, were identified as crucial factors for the intraspecific variability of the PsaPOX activity in the monokaryons.",
keywords = "Alkene cleavage, Basidiomycota, Biocatalysis, Dikaryon, Dye-decolorizing peroxidase (DyP), Gene expression, Gene mutation, Intraspecific variability, Monokaryon, Pleurotus sapidus",
author = "Krahe, {Nina Katharina} and Berger, {Ralf G.} and Martin Witt and Holger Zorn and Omarini, {Alejandra B.} and Franziska Ersoy",
note = "Funding Information: This research was funded by the BMBF cluster Bioeconomy International 2015, grant number 031B0307 A. The APC was funded by the Open Access fund of the Gottfried Wilhelm Leibniz Universit?t Hannover.",
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TY - JOUR

T1 - Monokaryotic Pleurotus sapidus Strains with Intraspecific Variability of an Alkene Cleaving DyP-Type Peroxidase Activity as a Result of Gene Mutation and Differential Gene Expression

AU - Krahe, Nina Katharina

AU - Berger, Ralf G.

AU - Witt, Martin

AU - Zorn, Holger

AU - Omarini, Alejandra B.

AU - Ersoy, Franziska

N1 - Funding Information: This research was funded by the BMBF cluster Bioeconomy International 2015, grant number 031B0307 A. The APC was funded by the Open Access fund of the Gottfried Wilhelm Leibniz Universit?t Hannover.

PY - 2021/1/29

Y1 - 2021/1/29

N2 - The basidiomycete Pleurotus sapidus produced a dye-decolorizing peroxidase (PsaPOX) with alkene cleavage activity, implying potential as a biocatalyst for the fragrance and flavor industry. To increase the activity, a daughter-generation of 101 basidiospore-derived monokaryons (MK) was used. After a pre-selection according to the growth rate, the activity analysis revealed a stable intraspecific variability of the strains regarding peroxidase and alkene cleavage activity of PsaPOX. Ten monokaryons reached activities up to 2.6-fold higher than the dikaryon, with MK16 showing the highest activity. Analysis of the PsaPOX gene identified three different enzyme variants. These were co-responsible for the observed differences in activities between strains as verified by heterologous expression in Komagataella phaffii. The mutation S371H in enzyme variant PsaPOX_high caused an activity increase alongside a higher protein stability, while the eleven mutations in variant PsaPOX_low resulted in an activity decrease, which was partially based on a shift of the pH optimum from 3.5 to 3.0. Transcriptional analysis revealed the increased expression of PsaPOX in MK16 as reason for the higher PsaPOX activity in comparison to other strains producing the same PsaPOX variant. Thus, different expression profiles, as well as enzyme variants, were identified as crucial factors for the intraspecific variability of the PsaPOX activity in the monokaryons.

AB - The basidiomycete Pleurotus sapidus produced a dye-decolorizing peroxidase (PsaPOX) with alkene cleavage activity, implying potential as a biocatalyst for the fragrance and flavor industry. To increase the activity, a daughter-generation of 101 basidiospore-derived monokaryons (MK) was used. After a pre-selection according to the growth rate, the activity analysis revealed a stable intraspecific variability of the strains regarding peroxidase and alkene cleavage activity of PsaPOX. Ten monokaryons reached activities up to 2.6-fold higher than the dikaryon, with MK16 showing the highest activity. Analysis of the PsaPOX gene identified three different enzyme variants. These were co-responsible for the observed differences in activities between strains as verified by heterologous expression in Komagataella phaffii. The mutation S371H in enzyme variant PsaPOX_high caused an activity increase alongside a higher protein stability, while the eleven mutations in variant PsaPOX_low resulted in an activity decrease, which was partially based on a shift of the pH optimum from 3.5 to 3.0. Transcriptional analysis revealed the increased expression of PsaPOX in MK16 as reason for the higher PsaPOX activity in comparison to other strains producing the same PsaPOX variant. Thus, different expression profiles, as well as enzyme variants, were identified as crucial factors for the intraspecific variability of the PsaPOX activity in the monokaryons.

KW - Alkene cleavage

KW - Basidiomycota

KW - Biocatalysis

KW - Dikaryon

KW - Dye-decolorizing peroxidase (DyP)

KW - Gene expression

KW - Gene mutation

KW - Intraspecific variability

KW - Monokaryon

KW - Pleurotus sapidus

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U2 - 10.3390/ijms22031363

DO - 10.3390/ijms22031363

M3 - Article

C2 - 33573012

AN - SCOPUS:85099981777

VL - 22

JO - International Journal of Molecular Sciences

JF - International Journal of Molecular Sciences

SN - 1661-6596

IS - 3

M1 - 1363

ER -