Details
| Original language | English |
|---|---|
| Pages (from-to) | 1247-1249 |
| Number of pages | 3 |
| Journal | Molecular ecology resources |
| Volume | 9 |
| Issue number | 4 |
| Publication status | Published - Jul 2009 |
Abstract
We developed 12 polymorphic microsatellite markers for the tetraploid halophyte Suaeda maritima (Chenopodiaceae). Population genetic parameters were estimated for three populations from different habitats (coastal and inland), using the program Tetrasat. Between two and 15 alleles per locus were observed. Mean expected heterozygosities (HE) and Shannon-Wiener Diversity Indices (H′) per locus and population ranged from zero to 0.852, and from zero to 2.990, respectively. The two inland populations were less diverse than the coastal one at most of the loci. All markers cross-amplified in the closely related Suaeda salsa, and all but one were transferable to Suaeda spicata and Suaeda salinaria.
Keywords
- Halophytes, Inland salt habitats, Microsatellites, SSRs, Suaeda maritima, Tetraploid
ASJC Scopus subject areas
- Biochemistry, Genetics and Molecular Biology(all)
- Biotechnology
- Agricultural and Biological Sciences(all)
- Ecology, Evolution, Behavior and Systematics
- Biochemistry, Genetics and Molecular Biology(all)
- Genetics
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In: Molecular ecology resources, Vol. 9, No. 4, 07.2009, p. 1247-1249.
Research output: Contribution to journal › Article › Research › peer review
}
TY - JOUR
T1 - Microsatellite markers for the tetraploid halophyte Suaeda maritima (L.) Dumort. (Chenopodiaceae) and cross-species amplification in related taxa
AU - Prinz, Kathleen
AU - Hensen, Isabell
AU - Schie, Stephan
AU - Debener, Thomas
AU - Weising, Kurt
PY - 2009/7
Y1 - 2009/7
N2 - We developed 12 polymorphic microsatellite markers for the tetraploid halophyte Suaeda maritima (Chenopodiaceae). Population genetic parameters were estimated for three populations from different habitats (coastal and inland), using the program Tetrasat. Between two and 15 alleles per locus were observed. Mean expected heterozygosities (HE) and Shannon-Wiener Diversity Indices (H′) per locus and population ranged from zero to 0.852, and from zero to 2.990, respectively. The two inland populations were less diverse than the coastal one at most of the loci. All markers cross-amplified in the closely related Suaeda salsa, and all but one were transferable to Suaeda spicata and Suaeda salinaria.
AB - We developed 12 polymorphic microsatellite markers for the tetraploid halophyte Suaeda maritima (Chenopodiaceae). Population genetic parameters were estimated for three populations from different habitats (coastal and inland), using the program Tetrasat. Between two and 15 alleles per locus were observed. Mean expected heterozygosities (HE) and Shannon-Wiener Diversity Indices (H′) per locus and population ranged from zero to 0.852, and from zero to 2.990, respectively. The two inland populations were less diverse than the coastal one at most of the loci. All markers cross-amplified in the closely related Suaeda salsa, and all but one were transferable to Suaeda spicata and Suaeda salinaria.
KW - Halophytes
KW - Inland salt habitats
KW - Microsatellites
KW - SSRs
KW - Suaeda maritima
KW - Tetraploid
UR - http://www.scopus.com/inward/record.url?scp=67649840198&partnerID=8YFLogxK
U2 - 10.1111/j.1755-0998.2009.02620.x
DO - 10.1111/j.1755-0998.2009.02620.x
M3 - Article
AN - SCOPUS:67649840198
VL - 9
SP - 1247
EP - 1249
JO - Molecular ecology resources
JF - Molecular ecology resources
SN - 1755-098X
IS - 4
ER -