Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments

Research output: Contribution to journalReview articleResearchpeer review

Authors

  • Geertje J. Pronk
  • Katja Heister
  • Cordula Vogel
  • Doreen Babin
  • Jörg Bachmann
  • Guo-Chun Ding
  • Franziska Ditterich
  • Martin H. Gerzabek
  • Julia Giebler
  • Michael Hemkemeyer
  • Ellen Kandeler
  • Yamuna Kunhi Mouvenchery
  • Anja Miltner
  • Christian Poll
  • Gabriele E. Schaumann
  • Kornelia Smalla
  • Annelie Steinbach
  • Irina Tanuwidjaja
  • Christoph C. Tebbe
  • Lukas Y. Wick
  • Susanne K. Woche
  • Kai U. Totsche
  • Michael Schloter
  • Ingrid Kögel-Knabner

External Research Organisations

  • Technical University of Munich (TUM)
  • Technische Universität Dresden
  • Julius Kühn Institute - Federal Research Centre for Cultivated Plants (JKI)
  • University of Hohenheim
  • University of Natural Resources and Applied Life Sciences (BOKU)
  • Helmholtz Zentrum München - German Research Center for Environmental Health
  • University of Koblenz-Landau
  • Johann Heinrich von Thünen Institute, Federal Research Institute for Rural Areas, Forestry and Fisheries
  • Friedrich Schiller University Jena
  • University of Waterloo
  • Utrecht University
  • China Agricultural University
  • Helmholtz Centre for Environmental Research (UFZ)
  • NSS College Manjeri
View graph of relations

Details

Original languageEnglish
Pages (from-to)9-22
Number of pages14
JournalBiology and Fertility of Soils
Volume53
Issue number1
Early online date24 Nov 2016
Publication statusPublished - Jan 2017

Abstract

Our understanding of the interactions between minerals, organic matter, and microorganisms at so-called biogeochemical interfaces in soil is still hampered by the inherent complexity of these systems. Artificial soil maturation experiments can help to bridge a gap in complexity between simple abiotic sorption experiments and larger-scale field experiments. By controlling other soil-forming factors, the effect of a particular variable can be identified in a simplified system. Here, we review the findings of a series of artificial soil incubation experiments with the aim of revealing general trends and conclusions. The artificial soils were designed to determine the effect of mineral composition and charcoal presence on the development of abiotic and biotic soil properties during maturation. In particular, the development of soil aggregates, organic matter (OM) composition and turnover, sorption properties, and the establishment of microbial community composition and function were considered. The main objectives of the research were to determine (1) how surface properties and sorption of chemicals modify biogeochemical interfaces; (2) how much time is required to form aggregates from mixtures of pure minerals, OM, and a microbial inoculum; and (3) how the presence of different mineral and charcoal surfaces affects aggregation, OM turnover, and the development of microbial community composition.

Keywords

    Biogeochemical interfaces, Experimental pedology, Interdisciplinary soil science, Secondary phyllosilicates, Soil microbial ecology, Soil organic matter

ASJC Scopus subject areas

Cite this

Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments. / Pronk, Geertje J.; Heister, Katja; Vogel, Cordula et al.
In: Biology and Fertility of Soils, Vol. 53, No. 1, 01.2017, p. 9-22.

Research output: Contribution to journalReview articleResearchpeer review

Pronk, GJ, Heister, K, Vogel, C, Babin, D, Bachmann, J, Ding, G-C, Ditterich, F, Gerzabek, MH, Giebler, J, Hemkemeyer, M, Kandeler, E, Mouvenchery, YK, Miltner, A, Poll, C, Schaumann, GE, Smalla, K, Steinbach, A, Tanuwidjaja, I, Tebbe, CC, Wick, LY, Woche, SK, Totsche, KU, Schloter, M & Kögel-Knabner, I 2017, 'Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments', Biology and Fertility of Soils, vol. 53, no. 1, pp. 9-22. https://doi.org/10.1007/s00374-016-1161-1
Pronk, G. J., Heister, K., Vogel, C., Babin, D., Bachmann, J., Ding, G.-C., Ditterich, F., Gerzabek, M. H., Giebler, J., Hemkemeyer, M., Kandeler, E., Mouvenchery, Y. K., Miltner, A., Poll, C., Schaumann, G. E., Smalla, K., Steinbach, A., Tanuwidjaja, I., Tebbe, C. C., ... Kögel-Knabner, I. (2017). Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments. Biology and Fertility of Soils, 53(1), 9-22. https://doi.org/10.1007/s00374-016-1161-1
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title = "Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments",
abstract = "Our understanding of the interactions between minerals, organic matter, and microorganisms at so-called biogeochemical interfaces in soil is still hampered by the inherent complexity of these systems. Artificial soil maturation experiments can help to bridge a gap in complexity between simple abiotic sorption experiments and larger-scale field experiments. By controlling other soil-forming factors, the effect of a particular variable can be identified in a simplified system. Here, we review the findings of a series of artificial soil incubation experiments with the aim of revealing general trends and conclusions. The artificial soils were designed to determine the effect of mineral composition and charcoal presence on the development of abiotic and biotic soil properties during maturation. In particular, the development of soil aggregates, organic matter (OM) composition and turnover, sorption properties, and the establishment of microbial community composition and function were considered. The main objectives of the research were to determine (1) how surface properties and sorption of chemicals modify biogeochemical interfaces; (2) how much time is required to form aggregates from mixtures of pure minerals, OM, and a microbial inoculum; and (3) how the presence of different mineral and charcoal surfaces affects aggregation, OM turnover, and the development of microbial community composition.",
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note = "Funding information: This project was carried out within the framework of the priority program 1315 “Biogeochemical Interfaces in Soil” funded by the German Research Foundation (DFG) in the project “Parent materials as major properties of the biogeochemical interface: integrative analysis” (KO1035/45-1). I.K.-K. and G.J.P. are grateful for the support from the Technical University of Munich–Institute for Advanced Study, funded by the German Excellence Initiative. We thank two anonymous reviewers for valuable comments on the manuscript.",
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T1 - Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments

AU - Pronk, Geertje J.

AU - Heister, Katja

AU - Vogel, Cordula

AU - Babin, Doreen

AU - Bachmann, Jörg

AU - Ding, Guo-Chun

AU - Ditterich, Franziska

AU - Gerzabek, Martin H.

AU - Giebler, Julia

AU - Hemkemeyer, Michael

AU - Kandeler, Ellen

AU - Mouvenchery, Yamuna Kunhi

AU - Miltner, Anja

AU - Poll, Christian

AU - Schaumann, Gabriele E.

AU - Smalla, Kornelia

AU - Steinbach, Annelie

AU - Tanuwidjaja, Irina

AU - Tebbe, Christoph C.

AU - Wick, Lukas Y.

AU - Woche, Susanne K.

AU - Totsche, Kai U.

AU - Schloter, Michael

AU - Kögel-Knabner, Ingrid

N1 - Funding information: This project was carried out within the framework of the priority program 1315 “Biogeochemical Interfaces in Soil” funded by the German Research Foundation (DFG) in the project “Parent materials as major properties of the biogeochemical interface: integrative analysis” (KO1035/45-1). I.K.-K. and G.J.P. are grateful for the support from the Technical University of Munich–Institute for Advanced Study, funded by the German Excellence Initiative. We thank two anonymous reviewers for valuable comments on the manuscript.

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Y1 - 2017/1

N2 - Our understanding of the interactions between minerals, organic matter, and microorganisms at so-called biogeochemical interfaces in soil is still hampered by the inherent complexity of these systems. Artificial soil maturation experiments can help to bridge a gap in complexity between simple abiotic sorption experiments and larger-scale field experiments. By controlling other soil-forming factors, the effect of a particular variable can be identified in a simplified system. Here, we review the findings of a series of artificial soil incubation experiments with the aim of revealing general trends and conclusions. The artificial soils were designed to determine the effect of mineral composition and charcoal presence on the development of abiotic and biotic soil properties during maturation. In particular, the development of soil aggregates, organic matter (OM) composition and turnover, sorption properties, and the establishment of microbial community composition and function were considered. The main objectives of the research were to determine (1) how surface properties and sorption of chemicals modify biogeochemical interfaces; (2) how much time is required to form aggregates from mixtures of pure minerals, OM, and a microbial inoculum; and (3) how the presence of different mineral and charcoal surfaces affects aggregation, OM turnover, and the development of microbial community composition.

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KW - Interdisciplinary soil science

KW - Secondary phyllosilicates

KW - Soil microbial ecology

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