Impact of prolonged rice cultivation on coupling relationship among C, Fe, and Fe-reducing bacteria over a 1000-year paddy soil chronosequence

Research output: Contribution to journalArticleResearchpeer review

Authors

  • Yalong Liu
  • Yuqi Dong
  • Tida Ge
  • Qaiser Hussain
  • Ping Wang
  • Jingkuan Wang
  • Yong Li
  • Georg Guggenberger
  • Jinshui Wu

External Research Organisations

  • Shenyang Agricultural University
  • Chinese Academy of Sciences (CAS)
  • University of Arid Agriculture Rawalpindi
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Details

Original languageEnglish
Pages (from-to)589-602
Number of pages14
JournalBiology and fertility of soils
Volume55
Issue number6
Early online date25 Jun 2019
Publication statusPublished - 1 Aug 2019

Abstract

Long-term soil chronosequences are valuable model systems for investigating pedogenesis and investigating the process of element coupling. Here, we assessed the coupling relationships among C, Fe, and Fe-reducing bacteria (Anaeromyxobacter, Geobacter, and Shewanella) in a paddy soil chronosequence of approximately 50 to 1000 years. Soils of the chronosequence originated from tidal marsh under nearly identical landscape and climate conditions. During 1000 years of rice cultivation, soil organic carbon (SOC) contents in surface horizons (0–20 cm) increased from 10.4 to 21.8 g kg−1. In contrast, total Fe contents declined from 59.6 to 45.1 g kg−1 during the initial 50 years of paddy rice cultivation and then further decreased at a low rate of 0.004 g kg−1 soil year−1 (equivalent to 10 kg ha−1 soil year−1). Organically complexed Fe oxides (Fep) increased from 219 to 642 mg g−1 with increasing time of pedogenesis, but free total Fe oxides (Fed) and amorphous Fe oxides (Feo) declined at early stage of soil development, followed by a slow accumulation at later stages of the chronosequence. Gene copy numbers of Anaeromyxobacter and Geobacter increased from 4.6 × 105 and 3.6 × 106 copies g−1 to 3.8 × 107 and 3.6 × 107 copies g−1 dry soil with continuous paddy rice cultivation, while concurrently Shewanella gene abundance decreased gradually from 4.5 × 105 to 9.3 × 104 copies g−1 dry soil. Using structural equation modeling (SEM), different coupling relationships were observed among C, Fe, and Fe-reducing bacteria for the first 300 years of paddy chronosequence and thereafter. Overall, all Fe-reducing bacteria did not show consistent variation. With the stable microbial community and iron oxide fractions, the microbially mediated dissimilatory coupling relationship between C and Fe becomes simple during 1000 years of paddy soil development.

Keywords

    C-Fe stoichiometry, Fe oxides, Fe-reducing bacteria, Paddy chronosequence

ASJC Scopus subject areas

Sustainable Development Goals

Cite this

Impact of prolonged rice cultivation on coupling relationship among C, Fe, and Fe-reducing bacteria over a 1000-year paddy soil chronosequence. / Liu, Yalong; Dong, Yuqi; Ge, Tida et al.
In: Biology and fertility of soils, Vol. 55, No. 6, 01.08.2019, p. 589-602.

Research output: Contribution to journalArticleResearchpeer review

Liu Y, Dong Y, Ge T, Hussain Q, Wang P, Wang J et al. Impact of prolonged rice cultivation on coupling relationship among C, Fe, and Fe-reducing bacteria over a 1000-year paddy soil chronosequence. Biology and fertility of soils. 2019 Aug 1;55(6):589-602. Epub 2019 Jun 25. doi: 10.1007/s00374-019-01370-x
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title = "Impact of prolonged rice cultivation on coupling relationship among C, Fe, and Fe-reducing bacteria over a 1000-year paddy soil chronosequence",
abstract = "Long-term soil chronosequences are valuable model systems for investigating pedogenesis and investigating the process of element coupling. Here, we assessed the coupling relationships among C, Fe, and Fe-reducing bacteria (Anaeromyxobacter, Geobacter, and Shewanella) in a paddy soil chronosequence of approximately 50 to 1000 years. Soils of the chronosequence originated from tidal marsh under nearly identical landscape and climate conditions. During 1000 years of rice cultivation, soil organic carbon (SOC) contents in surface horizons (0–20 cm) increased from 10.4 to 21.8 g kg−1. In contrast, total Fe contents declined from 59.6 to 45.1 g kg−1 during the initial 50 years of paddy rice cultivation and then further decreased at a low rate of 0.004 g kg−1 soil year−1 (equivalent to 10 kg ha−1 soil year−1). Organically complexed Fe oxides (Fep) increased from 219 to 642 mg g−1 with increasing time of pedogenesis, but free total Fe oxides (Fed) and amorphous Fe oxides (Feo) declined at early stage of soil development, followed by a slow accumulation at later stages of the chronosequence. Gene copy numbers of Anaeromyxobacter and Geobacter increased from 4.6 × 105 and 3.6 × 106 copies g−1 to 3.8 × 107 and 3.6 × 107 copies g−1 dry soil with continuous paddy rice cultivation, while concurrently Shewanella gene abundance decreased gradually from 4.5 × 105 to 9.3 × 104 copies g−1 dry soil. Using structural equation modeling (SEM), different coupling relationships were observed among C, Fe, and Fe-reducing bacteria for the first 300 years of paddy chronosequence and thereafter. Overall, all Fe-reducing bacteria did not show consistent variation. With the stable microbial community and iron oxide fractions, the microbially mediated dissimilatory coupling relationship between C and Fe becomes simple during 1000 years of paddy soil development.",
keywords = "C-Fe stoichiometry, Fe oxides, Fe-reducing bacteria, Paddy chronosequence",
author = "Yalong Liu and Yuqi Dong and Tida Ge and Qaiser Hussain and Ping Wang and Jingkuan Wang and Yong Li and Georg Guggenberger and Jinshui Wu",
note = "Funding information: This study was supported by the National Natural Science Foundation of China (41601305, 41807089, 41761134095), China Postdoctoral Science Foundation (2017M612573), the Youth Innovation Team Project of the Institute of Subtropical Agriculture, Chinese Academy of Sciences (2017QNCXTD_GTD), Hunan Province Base for Scientific and Technological Innovation Cooperation (2018WK4012), the International Postdoctoral Exchange Fellowship Program 2018 (20180017), and Chinese Academy of Sciences President{\textquoteright}s International Fellowship Initiative to Georg Guggenberger (2018VCA0031).",
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TY - JOUR

T1 - Impact of prolonged rice cultivation on coupling relationship among C, Fe, and Fe-reducing bacteria over a 1000-year paddy soil chronosequence

AU - Liu, Yalong

AU - Dong, Yuqi

AU - Ge, Tida

AU - Hussain, Qaiser

AU - Wang, Ping

AU - Wang, Jingkuan

AU - Li, Yong

AU - Guggenberger, Georg

AU - Wu, Jinshui

N1 - Funding information: This study was supported by the National Natural Science Foundation of China (41601305, 41807089, 41761134095), China Postdoctoral Science Foundation (2017M612573), the Youth Innovation Team Project of the Institute of Subtropical Agriculture, Chinese Academy of Sciences (2017QNCXTD_GTD), Hunan Province Base for Scientific and Technological Innovation Cooperation (2018WK4012), the International Postdoctoral Exchange Fellowship Program 2018 (20180017), and Chinese Academy of Sciences President’s International Fellowship Initiative to Georg Guggenberger (2018VCA0031).

PY - 2019/8/1

Y1 - 2019/8/1

N2 - Long-term soil chronosequences are valuable model systems for investigating pedogenesis and investigating the process of element coupling. Here, we assessed the coupling relationships among C, Fe, and Fe-reducing bacteria (Anaeromyxobacter, Geobacter, and Shewanella) in a paddy soil chronosequence of approximately 50 to 1000 years. Soils of the chronosequence originated from tidal marsh under nearly identical landscape and climate conditions. During 1000 years of rice cultivation, soil organic carbon (SOC) contents in surface horizons (0–20 cm) increased from 10.4 to 21.8 g kg−1. In contrast, total Fe contents declined from 59.6 to 45.1 g kg−1 during the initial 50 years of paddy rice cultivation and then further decreased at a low rate of 0.004 g kg−1 soil year−1 (equivalent to 10 kg ha−1 soil year−1). Organically complexed Fe oxides (Fep) increased from 219 to 642 mg g−1 with increasing time of pedogenesis, but free total Fe oxides (Fed) and amorphous Fe oxides (Feo) declined at early stage of soil development, followed by a slow accumulation at later stages of the chronosequence. Gene copy numbers of Anaeromyxobacter and Geobacter increased from 4.6 × 105 and 3.6 × 106 copies g−1 to 3.8 × 107 and 3.6 × 107 copies g−1 dry soil with continuous paddy rice cultivation, while concurrently Shewanella gene abundance decreased gradually from 4.5 × 105 to 9.3 × 104 copies g−1 dry soil. Using structural equation modeling (SEM), different coupling relationships were observed among C, Fe, and Fe-reducing bacteria for the first 300 years of paddy chronosequence and thereafter. Overall, all Fe-reducing bacteria did not show consistent variation. With the stable microbial community and iron oxide fractions, the microbially mediated dissimilatory coupling relationship between C and Fe becomes simple during 1000 years of paddy soil development.

AB - Long-term soil chronosequences are valuable model systems for investigating pedogenesis and investigating the process of element coupling. Here, we assessed the coupling relationships among C, Fe, and Fe-reducing bacteria (Anaeromyxobacter, Geobacter, and Shewanella) in a paddy soil chronosequence of approximately 50 to 1000 years. Soils of the chronosequence originated from tidal marsh under nearly identical landscape and climate conditions. During 1000 years of rice cultivation, soil organic carbon (SOC) contents in surface horizons (0–20 cm) increased from 10.4 to 21.8 g kg−1. In contrast, total Fe contents declined from 59.6 to 45.1 g kg−1 during the initial 50 years of paddy rice cultivation and then further decreased at a low rate of 0.004 g kg−1 soil year−1 (equivalent to 10 kg ha−1 soil year−1). Organically complexed Fe oxides (Fep) increased from 219 to 642 mg g−1 with increasing time of pedogenesis, but free total Fe oxides (Fed) and amorphous Fe oxides (Feo) declined at early stage of soil development, followed by a slow accumulation at later stages of the chronosequence. Gene copy numbers of Anaeromyxobacter and Geobacter increased from 4.6 × 105 and 3.6 × 106 copies g−1 to 3.8 × 107 and 3.6 × 107 copies g−1 dry soil with continuous paddy rice cultivation, while concurrently Shewanella gene abundance decreased gradually from 4.5 × 105 to 9.3 × 104 copies g−1 dry soil. Using structural equation modeling (SEM), different coupling relationships were observed among C, Fe, and Fe-reducing bacteria for the first 300 years of paddy chronosequence and thereafter. Overall, all Fe-reducing bacteria did not show consistent variation. With the stable microbial community and iron oxide fractions, the microbially mediated dissimilatory coupling relationship between C and Fe becomes simple during 1000 years of paddy soil development.

KW - C-Fe stoichiometry

KW - Fe oxides

KW - Fe-reducing bacteria

KW - Paddy chronosequence

UR - http://www.scopus.com/inward/record.url?scp=85068183166&partnerID=8YFLogxK

U2 - 10.1007/s00374-019-01370-x

DO - 10.1007/s00374-019-01370-x

M3 - Article

AN - SCOPUS:85068183166

VL - 55

SP - 589

EP - 602

JO - Biology and fertility of soils

JF - Biology and fertility of soils

SN - 0178-2762

IS - 6

ER -

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