Detection of Hypoxia in 2D and 3D Cell Culture Systems Using Genetically Encoded Fluorescent Hypoxia Sensors

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Original languageEnglish
Title of host publicationHypoxia
Subtitle of host publicationMethods and Protocols
EditorsDaniele M. Gilkes
PublisherHumana Press
Pages31-48
Number of pages18
Volume2755
ISBN (electronic)978-1-0716-3633-6
ISBN (print)978-1-0716-3632-9
Publication statusPublished - 7 Feb 2024

Publication series

NameMethods in molecular biology (Clifton, N.J.)
PublisherHumana Press
ISSN (Print)1064-3745

Abstract

In vivo oxygen availability varies widely between cellular microenvironments, depending on the tissue of origin and its cellular niche. It has long been known that too high or too low oxygen concentrations can act as a biological stressor. Thus, the precise control of oxygen availability should be a consideration for cell culture optimization, especially in the field of three-dimensional (3D) cell culture. In this chapter, we describe a system for visualizing oxygen limitations at a cellular level using human adipose tissue-derived mesenchymal stem cells (hAD-MSCs) that were genetically modified to express a fluorescent hypoxia sensor. This sensor can detect the activation of hypoxia-induced factors (HIF) transcription factors that lead to the expression of the oxygen-independent fluorescent protein, UnaG, at low oxygen concentrations. The response of these hypoxia reporter cells can be evaluated in two-dimensional (2D) and 3D cultivation platforms during exposure to hypoxia (1% O2) and normoxia (21% O2) using fluorescence microscopy and flow cytometry. We show that hypoxia reporter MSCs exhibit a hypoxia-induced fluorescence signal in both 2D and 3D cultivation platforms with fast decay kinetics after reoxygenation, rendering it a valuable tool for studying the cellular microenvironment and regenerative potential of hAD-MSCs in an in vivo-like setting.

Keywords

    3D cell culture, Adipose tissue-derived mesenchymal stem cells, GelMA, Genetically encoded hypoxia sensors, HIF-1, Hydrogel, Hypoxia reporter cells, MSC, UnaG

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Cite this

Detection of Hypoxia in 2D and 3D Cell Culture Systems Using Genetically Encoded Fluorescent Hypoxia Sensors. / Fleischhammer, Tabea Marie; Dienemann, Sandra; Ulber, Nico et al.
Hypoxia: Methods and Protocols. ed. / Daniele M. Gilkes. Vol. 2755 Humana Press, 2024. p. 31-48 (Methods in molecular biology (Clifton, N.J.)).

Research output: Chapter in book/report/conference proceedingContribution to book/anthologyResearchpeer review

Fleischhammer, TM, Dienemann, S, Ulber, N, Pepelanova, I & Lavrentieva, A 2024, Detection of Hypoxia in 2D and 3D Cell Culture Systems Using Genetically Encoded Fluorescent Hypoxia Sensors. in DM Gilkes (ed.), Hypoxia: Methods and Protocols. vol. 2755, Methods in molecular biology (Clifton, N.J.), Humana Press, pp. 31-48. https://doi.org/10.1007/978-1-0716-3633-6_2
Fleischhammer, T. M., Dienemann, S., Ulber, N., Pepelanova, I., & Lavrentieva, A. (2024). Detection of Hypoxia in 2D and 3D Cell Culture Systems Using Genetically Encoded Fluorescent Hypoxia Sensors. In D. M. Gilkes (Ed.), Hypoxia: Methods and Protocols (Vol. 2755, pp. 31-48). (Methods in molecular biology (Clifton, N.J.)). Humana Press. https://doi.org/10.1007/978-1-0716-3633-6_2
Fleischhammer TM, Dienemann S, Ulber N, Pepelanova I, Lavrentieva A. Detection of Hypoxia in 2D and 3D Cell Culture Systems Using Genetically Encoded Fluorescent Hypoxia Sensors. In Gilkes DM, editor, Hypoxia: Methods and Protocols. Vol. 2755. Humana Press. 2024. p. 31-48. (Methods in molecular biology (Clifton, N.J.)). doi: 10.1007/978-1-0716-3633-6_2
Fleischhammer, Tabea Marie ; Dienemann, Sandra ; Ulber, Nico et al. / Detection of Hypoxia in 2D and 3D Cell Culture Systems Using Genetically Encoded Fluorescent Hypoxia Sensors. Hypoxia: Methods and Protocols. editor / Daniele M. Gilkes. Vol. 2755 Humana Press, 2024. pp. 31-48 (Methods in molecular biology (Clifton, N.J.)).
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