Analysis of UAV-Acquired Wetland Orthomosaics Using GIS, Computer Vision, Computational Topology and Deep Learning

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  • Yamagata University
  • University of Sydney
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Original languageEnglish
Article number471
Number of pages24
JournalSensors
Volume21
Issue number2
Publication statusPublished - 11 Jan 2021

Abstract

Invasive blueberry species endanger the sensitive environment of wetlands and protection laws call for management measures. Therefore, methods are needed to identify blueberry bushes, locate them, and characterise their distribution and properties with a minimum of disturbance. UAVs (Unmanned Aerial Vehicles) and image analysis have become important tools for classification and detection approaches. In this study, techniques, such as GIS (Geographical Information Systems) and deep learning, were combined in order to detect invasive blueberry species in wetland environments. Images that were collected by UAV were used to produce orthomosaics, which were analysed to produce maps of blueberry location, distribution, and spread in each study site, as well as bush height and area information. Deep learning networks were used with transfer learning and unfrozen weights in order to automatically detect blueberry bushes reaching True Positive Values (TPV) of 93.83% and an Overall Accuracy (OA) of 98.83%. A refinement of the result masks reached a Dice of 0.624. This study provides an efficient and effective methodology to study wetlands while using different techniques.

Keywords

    ArcGIS, Big data, Blueberries, Deep learning, Image analysis, Orthomosaics, Segmentation refinement, UAVs

ASJC Scopus subject areas

Cite this

Analysis of UAV-Acquired Wetland Orthomosaics Using GIS, Computer Vision, Computational Topology and Deep Learning. / Kentsch, Sarah; Cabezas, Mariano; Tomhave, Luca et al.
In: Sensors, Vol. 21, No. 2, 471, 11.01.2021.

Research output: Contribution to journalArticleResearchpeer review

Kentsch S, Cabezas M, Tomhave L, Groß J, Burkhard B, Lopez Caceres ML et al. Analysis of UAV-Acquired Wetland Orthomosaics Using GIS, Computer Vision, Computational Topology and Deep Learning. Sensors. 2021 Jan 11;21(2):471. doi: 10.3390/s21020471
Kentsch, Sarah ; Cabezas, Mariano ; Tomhave, Luca et al. / Analysis of UAV-Acquired Wetland Orthomosaics Using GIS, Computer Vision, Computational Topology and Deep Learning. In: Sensors. 2021 ; Vol. 21, No. 2.
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abstract = "Invasive blueberry species endanger the sensitive environment of wetlands and protection laws call for management measures. Therefore, methods are needed to identify blueberry bushes, locate them, and characterise their distribution and properties with a minimum of disturbance. UAVs (Unmanned Aerial Vehicles) and image analysis have become important tools for classification and detection approaches. In this study, techniques, such as GIS (Geographical Information Systems) and deep learning, were combined in order to detect invasive blueberry species in wetland environments. Images that were collected by UAV were used to produce orthomosaics, which were analysed to produce maps of blueberry location, distribution, and spread in each study site, as well as bush height and area information. Deep learning networks were used with transfer learning and unfrozen weights in order to automatically detect blueberry bushes reaching True Positive Values (TPV) of 93.83% and an Overall Accuracy (OA) of 98.83%. A refinement of the result masks reached a Dice of 0.624. This study provides an efficient and effective methodology to study wetlands while using different techniques.",
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