Details
| Original language | English |
|---|---|
| Pages (from-to) | 329-339 |
| Number of pages | 11 |
| Journal | Computer Methods and Programs in Biomedicine |
| Volume | 137 |
| Publication status | Published - 1 Dec 2016 |
Abstract
Background and objective This paper presents a novel method for Alzheimer's disease classification via an automatic 3D caudate nucleus segmentation. Methods The proposed method consists of segmentation and classification steps. In the segmentation step, we propose a novel level set cost function. The proposed cost function is constrained by a sparse representation of local image features using a dictionary learning method. We present coupled dictionaries: a feature dictionary of a grayscale brain image and a label dictionary of a caudate nucleus label image. Using online dictionary learning, the coupled dictionaries are learned from the training data. The learned coupled dictionaries are embedded into a level set function. In the classification step, a region-based feature dictionary is built. The region-based feature dictionary is learned from shape features of the caudate nucleus in the training data. The classification is based on the measure of the similarity between the sparse representation of region-based shape features of the segmented caudate in the test image and the region-based feature dictionary. Results The experimental results demonstrate the superiority of our method over the state-of-the-art methods by achieving a high segmentation (91.5%) and classification (92.5%) accuracy. Conclusions In this paper, we find that the study of the caudate nucleus atrophy gives an advantage over the study of whole brain structure atrophy to detect Alzheimer's disease.
Keywords
- 3D segmentation, Alzheimer, Caudate nucleus, Dictionary learning, MRI-T1 medical image
ASJC Scopus subject areas
- Computer Science(all)
- Software
- Computer Science(all)
- Computer Science Applications
- Medicine(all)
- Health Informatics
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In: Computer Methods and Programs in Biomedicine, Vol. 137, 01.12.2016, p. 329-339.
Research output: Contribution to journal › Article › Research › peer review
}
TY - JOUR
T1 - Alzheimer's disease detection via automatic 3D caudate nucleus segmentation using coupled dictionary learning with level set formulation
AU - Al-shaikhli, Saif Dawood Salman
AU - Yang, Michael Ying
AU - Rosenhahn, Bodo
PY - 2016/12/1
Y1 - 2016/12/1
N2 - Background and objective This paper presents a novel method for Alzheimer's disease classification via an automatic 3D caudate nucleus segmentation. Methods The proposed method consists of segmentation and classification steps. In the segmentation step, we propose a novel level set cost function. The proposed cost function is constrained by a sparse representation of local image features using a dictionary learning method. We present coupled dictionaries: a feature dictionary of a grayscale brain image and a label dictionary of a caudate nucleus label image. Using online dictionary learning, the coupled dictionaries are learned from the training data. The learned coupled dictionaries are embedded into a level set function. In the classification step, a region-based feature dictionary is built. The region-based feature dictionary is learned from shape features of the caudate nucleus in the training data. The classification is based on the measure of the similarity between the sparse representation of region-based shape features of the segmented caudate in the test image and the region-based feature dictionary. Results The experimental results demonstrate the superiority of our method over the state-of-the-art methods by achieving a high segmentation (91.5%) and classification (92.5%) accuracy. Conclusions In this paper, we find that the study of the caudate nucleus atrophy gives an advantage over the study of whole brain structure atrophy to detect Alzheimer's disease.
AB - Background and objective This paper presents a novel method for Alzheimer's disease classification via an automatic 3D caudate nucleus segmentation. Methods The proposed method consists of segmentation and classification steps. In the segmentation step, we propose a novel level set cost function. The proposed cost function is constrained by a sparse representation of local image features using a dictionary learning method. We present coupled dictionaries: a feature dictionary of a grayscale brain image and a label dictionary of a caudate nucleus label image. Using online dictionary learning, the coupled dictionaries are learned from the training data. The learned coupled dictionaries are embedded into a level set function. In the classification step, a region-based feature dictionary is built. The region-based feature dictionary is learned from shape features of the caudate nucleus in the training data. The classification is based on the measure of the similarity between the sparse representation of region-based shape features of the segmented caudate in the test image and the region-based feature dictionary. Results The experimental results demonstrate the superiority of our method over the state-of-the-art methods by achieving a high segmentation (91.5%) and classification (92.5%) accuracy. Conclusions In this paper, we find that the study of the caudate nucleus atrophy gives an advantage over the study of whole brain structure atrophy to detect Alzheimer's disease.
KW - 3D segmentation
KW - Alzheimer
KW - Caudate nucleus
KW - Dictionary learning
KW - MRI-T1 medical image
UR - http://www.scopus.com/inward/record.url?scp=84991725973&partnerID=8YFLogxK
U2 - 10.1016/j.cmpb.2016.09.007
DO - 10.1016/j.cmpb.2016.09.007
M3 - Article
C2 - 28110736
AN - SCOPUS:84991725973
VL - 137
SP - 329
EP - 339
JO - Computer Methods and Programs in Biomedicine
JF - Computer Methods and Programs in Biomedicine
SN - 0169-2607
ER -