A bromodomain-DNA interaction facilitates acetylation-dependent bivalent nucleosome recognition by the BET protein BRDT

Research output: Contribution to journalArticleResearchpeer review

Authors

  • Thomas C.R. Miller
  • Bernd Simon
  • Vladimir Rybin
  • Helga Grötsch
  • Sandrine Curtet
  • Saadi Khochbin
  • Teresa Carlomagno
  • Christoph W. Müller

External Research Organisations

  • European Molecular Biology Laboratory
  • University Grenoble-Alpes (UGA)
  • Helmholtz Centre for Infection Research (HZI)
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Details

Original languageEnglish
Article number13855
JournalNature Communications
Volume7
Publication statusPublished - 19 Dec 2016

Abstract

Bromodomains are critical components of many chromatin modifying/remodelling proteins and are emerging therapeutic targets, yet how they interact with nucleosomes, rather than acetylated peptides, remains unclear. Using BRDT as a model, we characterized how the BET family of bromodomains interacts with site-specifically acetylated nucleosomes. Here we report that BRDT interacts with nucleosomes through its first (BD1), but not second (BD2) bromodomain, and that acetylated histone recognition by BD1 is complemented by a bromodomain-DNA interaction. Simultaneous DNA and histone recognition enhances BRDT's nucleosome binding affinity and specificity, and its ability to localize to acetylated chromatin in cells. Conservation of DNA binding in bromodomains of BRD2, BRD3 and BRD4, indicates that bivalent nucleosome recognition is a key feature of these bromodomains and possibly others. Our results elucidate the molecular mechanism of BRDT association with nucleosomes and identify structural features of the BET bromodomains that may be targeted for therapeutic inhibition.

ASJC Scopus subject areas

Cite this

A bromodomain-DNA interaction facilitates acetylation-dependent bivalent nucleosome recognition by the BET protein BRDT. / Miller, Thomas C.R.; Simon, Bernd; Rybin, Vladimir et al.
In: Nature Communications, Vol. 7, 13855, 19.12.2016.

Research output: Contribution to journalArticleResearchpeer review

Miller, T. C. R., Simon, B., Rybin, V., Grötsch, H., Curtet, S., Khochbin, S., Carlomagno, T., & Müller, C. W. (2016). A bromodomain-DNA interaction facilitates acetylation-dependent bivalent nucleosome recognition by the BET protein BRDT. Nature Communications, 7, Article 13855. https://doi.org/10.1038/ncomms13855, https://doi.org/10.15488/1167
Miller TCR, Simon B, Rybin V, Grötsch H, Curtet S, Khochbin S et al. A bromodomain-DNA interaction facilitates acetylation-dependent bivalent nucleosome recognition by the BET protein BRDT. Nature Communications. 2016 Dec 19;7:13855. doi: 10.1038/ncomms13855, 10.15488/1167
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AU - Miller, Thomas C.R.

AU - Simon, Bernd

AU - Rybin, Vladimir

AU - Grötsch, Helga

AU - Curtet, Sandrine

AU - Khochbin, Saadi

AU - Carlomagno, Teresa

AU - Müller, Christoph W.

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