The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

Autorschaft

  • E. Tisserant
  • A. Kohler
  • P. Dozolme-Seddas
  • R. Balestrini
  • K. Benabdellah
  • A. Colard
  • D. Croll
  • C. da Silva
  • S. K. Gomez
  • R. Koul
  • N. Ferrol
  • V. Fiorilli
  • D. Formey
  • P. H. Franken
  • N. Helber
  • M. Hijri
  • L. Lanfranco
  • E. Lindquist
  • Y. Liu
  • M. Malbreil
  • E. Morin
  • J. Poulain
  • H. Shapiro
  • D. van Tuinen
  • A. Waschke
  • C. Azcón-Aguilar
  • G. Bécard
  • P. Bonfante
  • M. J. Harrison
  • H. Küster
  • P. Lammers
  • U. Paszkowski
  • N. Requena
  • S. A. Rensing
  • C. Roux
  • I. R. Sanders
  • Y. Shachar-Hill
  • G. Tuskan
  • J. P.W. Young
  • V. Gianinazzi-Pearson
  • F. Martin

Externe Organisationen

  • Institut national de la recherche agronomique (INRA)
  • Universite de Bourgogne
  • Università di Torino
  • Spanish National Research Council (CSIC)
  • Université de Lausanne (UNIL)
  • ETH Zürich
  • Commissariat à l'énergie atomique et aux énergies alternatives (CEA)
  • Cornell University
  • New Mexico State University
  • Université de Toulouse
  • Leibniz-Institut für Gemüse- und Zierpflanzenbau Großbeeren (IGZ) e.V.
  • Karlsruher Institut für Technologie (KIT)
  • Université de Montréal
  • U.S. Department of Energy
  • Albert-Ludwigs-Universität Freiburg
  • Michigan State University (MSU)
  • Oak Ridge National Laboratory
  • University of York
Forschungs-netzwerk anzeigen

Details

OriginalspracheEnglisch
Seiten (von - bis)755-769
Seitenumfang15
FachzeitschriftNew Phytologist
Jahrgang193
Ausgabenummer3
PublikationsstatusVeröffentlicht - 1 Feb. 2012

Abstract

• The arbuscular mycorrhizal symbiosis is arguably the most ecologically important eukaryotic symbiosis, yet it is poorly understood at the molecular level. To provide novel insights into the molecular basis of symbiosis-associated traits, we report the first genome-wide analysis of the transcriptome from Glomus intraradices DAOM 197198. • We generated a set of 25906 nonredundant virtual transcripts (NRVTs) transcribed in germinated spores, extraradical mycelium and symbiotic roots using Sanger and 454 sequencing. NRVTs were used to construct an oligoarray for investigating gene expression. • We identified transcripts coding for the meiotic recombination machinery, as well as meiosis-specific proteins, suggesting that the lack of a known sexual cycle in G. intraradices is not a result of major deletions of genes essential for sexual reproduction and meiosis. Induced expression of genes encoding membrane transporters and small secreted proteins in intraradical mycelium, together with the lack of expression of hydrolytic enzymes acting on plant cell wall polysaccharides, are all features of G. intraradices that are shared with ectomycorrhizal symbionts and obligate biotrophic pathogens. • Our results illuminate the genetic basis of symbiosis-related traits of the most ancient lineage of plant biotrophs, advancing future research on these agriculturally and ecologically important symbionts.

ASJC Scopus Sachgebiete

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The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont. / Tisserant, E.; Kohler, A.; Dozolme-Seddas, P. et al.
in: New Phytologist, Jahrgang 193, Nr. 3, 01.02.2012, S. 755-769.

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

Tisserant, E, Kohler, A, Dozolme-Seddas, P, Balestrini, R, Benabdellah, K, Colard, A, Croll, D, da Silva, C, Gomez, SK, Koul, R, Ferrol, N, Fiorilli, V, Formey, D, Franken, PH, Helber, N, Hijri, M, Lanfranco, L, Lindquist, E, Liu, Y, Malbreil, M, Morin, E, Poulain, J, Shapiro, H, van Tuinen, D, Waschke, A, Azcón-Aguilar, C, Bécard, G, Bonfante, P, Harrison, MJ, Küster, H, Lammers, P, Paszkowski, U, Requena, N, Rensing, SA, Roux, C, Sanders, IR, Shachar-Hill, Y, Tuskan, G, Young, JPW, Gianinazzi-Pearson, V & Martin, F 2012, 'The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont', New Phytologist, Jg. 193, Nr. 3, S. 755-769. https://doi.org/10.1111/j.1469-8137.2011.03948.x
Tisserant, E., Kohler, A., Dozolme-Seddas, P., Balestrini, R., Benabdellah, K., Colard, A., Croll, D., da Silva, C., Gomez, S. K., Koul, R., Ferrol, N., Fiorilli, V., Formey, D., Franken, P. H., Helber, N., Hijri, M., Lanfranco, L., Lindquist, E., Liu, Y., ... Martin, F. (2012). The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont. New Phytologist, 193(3), 755-769. https://doi.org/10.1111/j.1469-8137.2011.03948.x
Tisserant E, Kohler A, Dozolme-Seddas P, Balestrini R, Benabdellah K, Colard A et al. The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont. New Phytologist. 2012 Feb 1;193(3):755-769. doi: 10.1111/j.1469-8137.2011.03948.x
Tisserant, E. ; Kohler, A. ; Dozolme-Seddas, P. et al. / The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont. in: New Phytologist. 2012 ; Jahrgang 193, Nr. 3. S. 755-769.
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title = "The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont",
abstract = "• The arbuscular mycorrhizal symbiosis is arguably the most ecologically important eukaryotic symbiosis, yet it is poorly understood at the molecular level. To provide novel insights into the molecular basis of symbiosis-associated traits, we report the first genome-wide analysis of the transcriptome from Glomus intraradices DAOM 197198. • We generated a set of 25906 nonredundant virtual transcripts (NRVTs) transcribed in germinated spores, extraradical mycelium and symbiotic roots using Sanger and 454 sequencing. NRVTs were used to construct an oligoarray for investigating gene expression. • We identified transcripts coding for the meiotic recombination machinery, as well as meiosis-specific proteins, suggesting that the lack of a known sexual cycle in G. intraradices is not a result of major deletions of genes essential for sexual reproduction and meiosis. Induced expression of genes encoding membrane transporters and small secreted proteins in intraradical mycelium, together with the lack of expression of hydrolytic enzymes acting on plant cell wall polysaccharides, are all features of G. intraradices that are shared with ectomycorrhizal symbionts and obligate biotrophic pathogens. • Our results illuminate the genetic basis of symbiosis-related traits of the most ancient lineage of plant biotrophs, advancing future research on these agriculturally and ecologically important symbionts.",
keywords = "Glomeromycota, Glomus, Meiosis and recombination genes, Mycorrhiza, Small secreted proteins, Symbiosis, Transcript profiling",
author = "E. Tisserant and A. Kohler and P. Dozolme-Seddas and R. Balestrini and K. Benabdellah and A. Colard and D. Croll and {da Silva}, C. and Gomez, {S. K.} and R. Koul and N. Ferrol and V. Fiorilli and D. Formey and Franken, {P. H.} and N. Helber and M. Hijri and L. Lanfranco and E. Lindquist and Y. Liu and M. Malbreil and E. Morin and J. Poulain and H. Shapiro and {van Tuinen}, D. and A. Waschke and C. Azc{\'o}n-Aguilar and G. B{\'e}card and P. Bonfante and Harrison, {M. J.} and H. K{\"u}ster and P. Lammers and U. Paszkowski and N. Requena and Rensing, {S. A.} and C. Roux and Sanders, {I. R.} and Y. Shachar-Hill and G. Tuskan and Young, {J. P.W.} and V. Gianinazzi-Pearson and F. Martin",
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journal = "New Phytologist",
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TY - JOUR

T1 - The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (DAOM 197198) reveals functional tradeoffs in an obligate symbiont

AU - Tisserant, E.

AU - Kohler, A.

AU - Dozolme-Seddas, P.

AU - Balestrini, R.

AU - Benabdellah, K.

AU - Colard, A.

AU - Croll, D.

AU - da Silva, C.

AU - Gomez, S. K.

AU - Koul, R.

AU - Ferrol, N.

AU - Fiorilli, V.

AU - Formey, D.

AU - Franken, P. H.

AU - Helber, N.

AU - Hijri, M.

AU - Lanfranco, L.

AU - Lindquist, E.

AU - Liu, Y.

AU - Malbreil, M.

AU - Morin, E.

AU - Poulain, J.

AU - Shapiro, H.

AU - van Tuinen, D.

AU - Waschke, A.

AU - Azcón-Aguilar, C.

AU - Bécard, G.

AU - Bonfante, P.

AU - Harrison, M. J.

AU - Küster, H.

AU - Lammers, P.

AU - Paszkowski, U.

AU - Requena, N.

AU - Rensing, S. A.

AU - Roux, C.

AU - Sanders, I. R.

AU - Shachar-Hill, Y.

AU - Tuskan, G.

AU - Young, J. P.W.

AU - Gianinazzi-Pearson, V.

AU - Martin, F.

PY - 2012/2/1

Y1 - 2012/2/1

N2 - • The arbuscular mycorrhizal symbiosis is arguably the most ecologically important eukaryotic symbiosis, yet it is poorly understood at the molecular level. To provide novel insights into the molecular basis of symbiosis-associated traits, we report the first genome-wide analysis of the transcriptome from Glomus intraradices DAOM 197198. • We generated a set of 25906 nonredundant virtual transcripts (NRVTs) transcribed in germinated spores, extraradical mycelium and symbiotic roots using Sanger and 454 sequencing. NRVTs were used to construct an oligoarray for investigating gene expression. • We identified transcripts coding for the meiotic recombination machinery, as well as meiosis-specific proteins, suggesting that the lack of a known sexual cycle in G. intraradices is not a result of major deletions of genes essential for sexual reproduction and meiosis. Induced expression of genes encoding membrane transporters and small secreted proteins in intraradical mycelium, together with the lack of expression of hydrolytic enzymes acting on plant cell wall polysaccharides, are all features of G. intraradices that are shared with ectomycorrhizal symbionts and obligate biotrophic pathogens. • Our results illuminate the genetic basis of symbiosis-related traits of the most ancient lineage of plant biotrophs, advancing future research on these agriculturally and ecologically important symbionts.

AB - • The arbuscular mycorrhizal symbiosis is arguably the most ecologically important eukaryotic symbiosis, yet it is poorly understood at the molecular level. To provide novel insights into the molecular basis of symbiosis-associated traits, we report the first genome-wide analysis of the transcriptome from Glomus intraradices DAOM 197198. • We generated a set of 25906 nonredundant virtual transcripts (NRVTs) transcribed in germinated spores, extraradical mycelium and symbiotic roots using Sanger and 454 sequencing. NRVTs were used to construct an oligoarray for investigating gene expression. • We identified transcripts coding for the meiotic recombination machinery, as well as meiosis-specific proteins, suggesting that the lack of a known sexual cycle in G. intraradices is not a result of major deletions of genes essential for sexual reproduction and meiosis. Induced expression of genes encoding membrane transporters and small secreted proteins in intraradical mycelium, together with the lack of expression of hydrolytic enzymes acting on plant cell wall polysaccharides, are all features of G. intraradices that are shared with ectomycorrhizal symbionts and obligate biotrophic pathogens. • Our results illuminate the genetic basis of symbiosis-related traits of the most ancient lineage of plant biotrophs, advancing future research on these agriculturally and ecologically important symbionts.

KW - Glomeromycota

KW - Glomus

KW - Meiosis and recombination genes

KW - Mycorrhiza

KW - Small secreted proteins

KW - Symbiosis

KW - Transcript profiling

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U2 - 10.1111/j.1469-8137.2011.03948.x

DO - 10.1111/j.1469-8137.2011.03948.x

M3 - Article

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AN - SCOPUS:84855792250

VL - 193

SP - 755

EP - 769

JO - New Phytologist

JF - New Phytologist

SN - 0028-646X

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ER -

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