The interaction induced response next to changes in activity and community composition provide a comprehensive understanding of the resilience of the microorganisms after peat mining

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  • Universiteit Gent
  • University of Warmia and Mazury
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OriginalspracheEnglisch
Titel des SammelwerksProceedings of the II International Symposium on Growing Media, Soilless Cultivation, and Compost Utilization in Horticulture
Herausgeber (Verlag)International Society for Horticultural Science
Seiten359-368
Seitenumfang10
ISBN (Print)978 94 6261 313 3
PublikationsstatusVeröffentlicht - 20 Aug. 2021
VeranstaltungII International Symposium on Growing Media, Soilless Cultivation, and Compost Utilization in Horticulture - Ghent, Belgien
Dauer: 22 Aug. 202127 Aug. 2021
Konferenznummer: 2

Publikationsreihe

NameActa Horticulturae
Herausgeber (Verlag)International Society for Horticultural Science
Band1317
ISSN (Print)0567-7572
ISSN (elektronisch)2406-6168

Abstract

Ombrotrophic peatlands are a recognized global carbon reservoir and peat remains and will be the most important constituent in horticulture. Without restoration and peat regrowth, harvested peatlands are dramatically altered, impairing their carbon sink function, with consequences for methane turnover. This study determined the response of the underlying microbial communities catalyzing methane production and oxidation. We hypothesize that with the return of Sphagnum spp. postharvest, methane turnover potential and the corresponding microbial communities will converge in a natural and restored peatland. We determined the potential methane production and oxidation rates in natural, actively mined, abandoned, and restored peatlands over two consecutive years. In all sites, the methanogenic and methanotrophic population sizes were enumerated using quantitative PCR assays targeting the mcrA and pmoA genes, respectively. Peat mining adversely affected methane turnover potential, but the rates recovered in the restored site. In addition, little is known of the response and recovery of the methanotrophic interactome to disturbances. In a follow-up study, we determined the recovery of the methanotrophic interactome as inferred by a co-occurrence network analysis comparing a pristine and restored peatland. We coupled a DNA-based stable isotope probing (SIP) approach using [13C]CH4 to a co-occurrence network analysis derived from the 13C-enriched 16S rRNA gene sequences to relate the response in methanotrophic activity to the structuring of the interaction network. Bacterial community composition was distinct in both peatlands. Likewise, the methanotrophic interactome was profoundly altered in the restored peatland. Structuring of the interaction network after peat mining resulted in the loss of complexity and modularity, indicating a less connected and efficient network, which may have consequences in the event of recurring/future disturbances. Therefore, determining the response of the methane-driven interaction network, in addition to relating methanotrophic activity to community composition/abundances, provided a more comprehensive understanding of the resilience of the methanotrophs.

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  • Agrar- und Biowissenschaften (insg.)
  • Gartenbau

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The interaction induced response next to changes in activity and community composition provide a comprehensive understanding of the resilience of the microorganisms after peat mining. / Grunert, O.; Kaupper, T.; Harnisz, M. et al.
Proceedings of the II International Symposium on Growing Media, Soilless Cultivation, and Compost Utilization in Horticulture. International Society for Horticultural Science, 2021. S. 359-368 (Acta Horticulturae; Band 1317).

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandAufsatz in KonferenzbandForschungPeer-Review

Grunert, O, Kaupper, T, Harnisz, M, Horn, MA & Ho, A 2021, The interaction induced response next to changes in activity and community composition provide a comprehensive understanding of the resilience of the microorganisms after peat mining. in Proceedings of the II International Symposium on Growing Media, Soilless Cultivation, and Compost Utilization in Horticulture. Acta Horticulturae, Bd. 1317, International Society for Horticultural Science, S. 359-368, II International Symposium on Growing Media, Soilless Cultivation, and Compost Utilization in Horticulture, Ghent, Belgien, 22 Aug. 2021. https://doi.org/10.17660/actahortic.2021.1317.42
Grunert, O., Kaupper, T., Harnisz, M., Horn, M. A., & Ho, A. (2021). The interaction induced response next to changes in activity and community composition provide a comprehensive understanding of the resilience of the microorganisms after peat mining. In Proceedings of the II International Symposium on Growing Media, Soilless Cultivation, and Compost Utilization in Horticulture (S. 359-368). (Acta Horticulturae; Band 1317). International Society for Horticultural Science. https://doi.org/10.17660/actahortic.2021.1317.42
Grunert O, Kaupper T, Harnisz M, Horn MA, Ho A. The interaction induced response next to changes in activity and community composition provide a comprehensive understanding of the resilience of the microorganisms after peat mining. in Proceedings of the II International Symposium on Growing Media, Soilless Cultivation, and Compost Utilization in Horticulture. International Society for Horticultural Science. 2021. S. 359-368. (Acta Horticulturae). doi: 10.17660/actahortic.2021.1317.42
Grunert, O. ; Kaupper, T. ; Harnisz, M. et al. / The interaction induced response next to changes in activity and community composition provide a comprehensive understanding of the resilience of the microorganisms after peat mining. Proceedings of the II International Symposium on Growing Media, Soilless Cultivation, and Compost Utilization in Horticulture. International Society for Horticultural Science, 2021. S. 359-368 (Acta Horticulturae).
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abstract = "Ombrotrophic peatlands are a recognized global carbon reservoir and peat remains and will be the most important constituent in horticulture. Without restoration and peat regrowth, harvested peatlands are dramatically altered, impairing their carbon sink function, with consequences for methane turnover. This study determined the response of the underlying microbial communities catalyzing methane production and oxidation. We hypothesize that with the return of Sphagnum spp. postharvest, methane turnover potential and the corresponding microbial communities will converge in a natural and restored peatland. We determined the potential methane production and oxidation rates in natural, actively mined, abandoned, and restored peatlands over two consecutive years. In all sites, the methanogenic and methanotrophic population sizes were enumerated using quantitative PCR assays targeting the mcrA and pmoA genes, respectively. Peat mining adversely affected methane turnover potential, but the rates recovered in the restored site. In addition, little is known of the response and recovery of the methanotrophic interactome to disturbances. In a follow-up study, we determined the recovery of the methanotrophic interactome as inferred by a co-occurrence network analysis comparing a pristine and restored peatland. We coupled a DNA-based stable isotope probing (SIP) approach using [13C]CH4 to a co-occurrence network analysis derived from the 13C-enriched 16S rRNA gene sequences to relate the response in methanotrophic activity to the structuring of the interaction network. Bacterial community composition was distinct in both peatlands. Likewise, the methanotrophic interactome was profoundly altered in the restored peatland. Structuring of the interaction network after peat mining resulted in the loss of complexity and modularity, indicating a less connected and efficient network, which may have consequences in the event of recurring/future disturbances. Therefore, determining the response of the methane-driven interaction network, in addition to relating methanotrophic activity to community composition/abundances, provided a more comprehensive understanding of the resilience of the methanotrophs.",
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T1 - The interaction induced response next to changes in activity and community composition provide a comprehensive understanding of the resilience of the microorganisms after peat mining

AU - Grunert, O.

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AU - Harnisz, M.

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AU - Ho, A.

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N2 - Ombrotrophic peatlands are a recognized global carbon reservoir and peat remains and will be the most important constituent in horticulture. Without restoration and peat regrowth, harvested peatlands are dramatically altered, impairing their carbon sink function, with consequences for methane turnover. This study determined the response of the underlying microbial communities catalyzing methane production and oxidation. We hypothesize that with the return of Sphagnum spp. postharvest, methane turnover potential and the corresponding microbial communities will converge in a natural and restored peatland. We determined the potential methane production and oxidation rates in natural, actively mined, abandoned, and restored peatlands over two consecutive years. In all sites, the methanogenic and methanotrophic population sizes were enumerated using quantitative PCR assays targeting the mcrA and pmoA genes, respectively. Peat mining adversely affected methane turnover potential, but the rates recovered in the restored site. In addition, little is known of the response and recovery of the methanotrophic interactome to disturbances. In a follow-up study, we determined the recovery of the methanotrophic interactome as inferred by a co-occurrence network analysis comparing a pristine and restored peatland. We coupled a DNA-based stable isotope probing (SIP) approach using [13C]CH4 to a co-occurrence network analysis derived from the 13C-enriched 16S rRNA gene sequences to relate the response in methanotrophic activity to the structuring of the interaction network. Bacterial community composition was distinct in both peatlands. Likewise, the methanotrophic interactome was profoundly altered in the restored peatland. Structuring of the interaction network after peat mining resulted in the loss of complexity and modularity, indicating a less connected and efficient network, which may have consequences in the event of recurring/future disturbances. Therefore, determining the response of the methane-driven interaction network, in addition to relating methanotrophic activity to community composition/abundances, provided a more comprehensive understanding of the resilience of the methanotrophs.

AB - Ombrotrophic peatlands are a recognized global carbon reservoir and peat remains and will be the most important constituent in horticulture. Without restoration and peat regrowth, harvested peatlands are dramatically altered, impairing their carbon sink function, with consequences for methane turnover. This study determined the response of the underlying microbial communities catalyzing methane production and oxidation. We hypothesize that with the return of Sphagnum spp. postharvest, methane turnover potential and the corresponding microbial communities will converge in a natural and restored peatland. We determined the potential methane production and oxidation rates in natural, actively mined, abandoned, and restored peatlands over two consecutive years. In all sites, the methanogenic and methanotrophic population sizes were enumerated using quantitative PCR assays targeting the mcrA and pmoA genes, respectively. Peat mining adversely affected methane turnover potential, but the rates recovered in the restored site. In addition, little is known of the response and recovery of the methanotrophic interactome to disturbances. In a follow-up study, we determined the recovery of the methanotrophic interactome as inferred by a co-occurrence network analysis comparing a pristine and restored peatland. We coupled a DNA-based stable isotope probing (SIP) approach using [13C]CH4 to a co-occurrence network analysis derived from the 13C-enriched 16S rRNA gene sequences to relate the response in methanotrophic activity to the structuring of the interaction network. Bacterial community composition was distinct in both peatlands. Likewise, the methanotrophic interactome was profoundly altered in the restored peatland. Structuring of the interaction network after peat mining resulted in the loss of complexity and modularity, indicating a less connected and efficient network, which may have consequences in the event of recurring/future disturbances. Therefore, determining the response of the methane-driven interaction network, in addition to relating methanotrophic activity to community composition/abundances, provided a more comprehensive understanding of the resilience of the methanotrophs.

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