Synthesis of sulfonamide, amide and amine hybrid pharmacophore, an entry of new class of carbonic anhydrase II inhibitors and evaluation of chemo-informatics and binding analysis

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

Autoren

  • Attique Ahmed
  • Pervaiz Ali Channar
  • Aamer Saeed
  • Markus Kalesse
  • Mehar Ali Kazi
  • Fayaz Ali Larik
  • Qamar Abbas
  • Mubashir Hassan
  • Hussain Raza
  • Sung Yum Seo

Organisationseinheiten

Externe Organisationen

  • Quaid-I-Azam University
  • University of Sindh
  • Kongju National University
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Details

OriginalspracheEnglisch
Seiten (von - bis)624-630
Seitenumfang7
FachzeitschriftBioorganic chemistry
Jahrgang86
Frühes Online-Datum10 Feb. 2019
PublikationsstatusVeröffentlicht - Mai 2019

Abstract

Selective inhibition of carbonic anhydrase (CA) enzyme is an active area of research for medicinal chemists. In the current account, a hybrid pharmacophore approach was employed to design sulfonamide, amide and amine containing new series of potent carbonic anhydrase II inhibitors. The aromatic fragment associated with pharmacophore was altered suitably in order to find effective inhibitors of CA-II. All the derivatives 4a-4m showed better inhibition compared to the standard acetazolamide. In particular, compound 4l exhibited significant inhibition with IC 50 value of 0.01796 ± 0.00036 µM. The chemo-informatics analysis justified that all the designed compounds possess <10 HBA and <5 HBD. The ligands-protein binding analyses showed that 4l confined in the active binding pocket with three hydrogen bonds observed with His63, Asn66 and Thr197 residues.

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Synthesis of sulfonamide, amide and amine hybrid pharmacophore, an entry of new class of carbonic anhydrase II inhibitors and evaluation of chemo-informatics and binding analysis. / Ahmed, Attique; Channar, Pervaiz Ali; Saeed, Aamer et al.
in: Bioorganic chemistry, Jahrgang 86, 05.2019, S. 624-630.

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

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title = "Synthesis of sulfonamide, amide and amine hybrid pharmacophore, an entry of new class of carbonic anhydrase II inhibitors and evaluation of chemo-informatics and binding analysis",
abstract = " Selective inhibition of carbonic anhydrase (CA) enzyme is an active area of research for medicinal chemists. In the current account, a hybrid pharmacophore approach was employed to design sulfonamide, amide and amine containing new series of potent carbonic anhydrase II inhibitors. The aromatic fragment associated with pharmacophore was altered suitably in order to find effective inhibitors of CA-II. All the derivatives 4a-4m showed better inhibition compared to the standard acetazolamide. In particular, compound 4l exhibited significant inhibition with IC 50 value of 0.01796 ± 0.00036 µM. The chemo-informatics analysis justified that all the designed compounds possess <10 HBA and <5 HBD. The ligands-protein binding analyses showed that 4l confined in the active binding pocket with three hydrogen bonds observed with His63, Asn66 and Thr197 residues. ",
keywords = "Binding analysis, Carbonic anhydrase II inhibition, Chemo-informatics, Hybrid pharmacophore, Synthesis",
author = "Attique Ahmed and Channar, {Pervaiz Ali} and Aamer Saeed and Markus Kalesse and Kazi, {Mehar Ali} and Larik, {Fayaz Ali} and Qamar Abbas and Mubashir Hassan and Hussain Raza and Seo, {Sung Yum}",
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TY - JOUR

T1 - Synthesis of sulfonamide, amide and amine hybrid pharmacophore, an entry of new class of carbonic anhydrase II inhibitors and evaluation of chemo-informatics and binding analysis

AU - Ahmed, Attique

AU - Channar, Pervaiz Ali

AU - Saeed, Aamer

AU - Kalesse, Markus

AU - Kazi, Mehar Ali

AU - Larik, Fayaz Ali

AU - Abbas, Qamar

AU - Hassan, Mubashir

AU - Raza, Hussain

AU - Seo, Sung Yum

PY - 2019/5

Y1 - 2019/5

N2 - Selective inhibition of carbonic anhydrase (CA) enzyme is an active area of research for medicinal chemists. In the current account, a hybrid pharmacophore approach was employed to design sulfonamide, amide and amine containing new series of potent carbonic anhydrase II inhibitors. The aromatic fragment associated with pharmacophore was altered suitably in order to find effective inhibitors of CA-II. All the derivatives 4a-4m showed better inhibition compared to the standard acetazolamide. In particular, compound 4l exhibited significant inhibition with IC 50 value of 0.01796 ± 0.00036 µM. The chemo-informatics analysis justified that all the designed compounds possess <10 HBA and <5 HBD. The ligands-protein binding analyses showed that 4l confined in the active binding pocket with three hydrogen bonds observed with His63, Asn66 and Thr197 residues.

AB - Selective inhibition of carbonic anhydrase (CA) enzyme is an active area of research for medicinal chemists. In the current account, a hybrid pharmacophore approach was employed to design sulfonamide, amide and amine containing new series of potent carbonic anhydrase II inhibitors. The aromatic fragment associated with pharmacophore was altered suitably in order to find effective inhibitors of CA-II. All the derivatives 4a-4m showed better inhibition compared to the standard acetazolamide. In particular, compound 4l exhibited significant inhibition with IC 50 value of 0.01796 ± 0.00036 µM. The chemo-informatics analysis justified that all the designed compounds possess <10 HBA and <5 HBD. The ligands-protein binding analyses showed that 4l confined in the active binding pocket with three hydrogen bonds observed with His63, Asn66 and Thr197 residues.

KW - Binding analysis

KW - Carbonic anhydrase II inhibition

KW - Chemo-informatics

KW - Hybrid pharmacophore

KW - Synthesis

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U2 - 10.1016/j.bioorg.2019.01.060

DO - 10.1016/j.bioorg.2019.01.060

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EP - 630

JO - Bioorganic chemistry

JF - Bioorganic chemistry

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