Synthesis of extended spacer-linked neooligodeoxysaccharides by metathesis olefination and evaluation of their RNA-binding properties

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OriginalspracheEnglisch
Seiten (von - bis)3505-3521
Seitenumfang17
FachzeitschriftTetrahedron
Jahrgang60
Ausgabenummer15
PublikationsstatusVeröffentlicht - 17 März 2004

Abstract

The preparation of linear 1,4-butanediol-linked oligodeoxysugars 50-53, 58 and 60 is described which are potential binders to polynucleotides. Various aminodeoxymonosaccharides 9, 13-18, 30, 31 and 40-42 which are either allylated at the anomeric center or at C4 were subjected to the metathesis olefination protocol. Depending on the position of allylation E/Z-mixtures of C 2-symmetric head-to-head or tail-to-tail homodimers were formed. Among them, saccharides 13, 30, 31 and 40 were transformed into the corresponding 1,4-butanediol linked disaccharides 50-53 by catalytic hydrogenation of the central olefinic double bond and exhaustive deprotection. In order to target extended spacer-linked neooligosaccharides homodimeric aminoglycoside 37 was bisallylated and subjected to cross metathesis conditions using methyl 4-O-allyl daunosamide 40 as reaction partner which yielded two desired trimeric and tetrameric linearly spacer-linked daunosamine derivatives. After hydrogenation and deprotection two additional probes 58 and 60 for nucleic acid binding studies were at hand.

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Synthesis of extended spacer-linked neooligodeoxysaccharides by metathesis olefination and evaluation of their RNA-binding properties. / Kirschning, Andreas; Chen, Guang Wu; Jaunzems, Janis et al.
in: Tetrahedron, Jahrgang 60, Nr. 15, 17.03.2004, S. 3505-3521.

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

Kirschning A, Chen GW, Jaunzems J, Jesberger M, Kalesse M, Lindner M. Synthesis of extended spacer-linked neooligodeoxysaccharides by metathesis olefination and evaluation of their RNA-binding properties. Tetrahedron. 2004 Mär 17;60(15):3505-3521. doi: 10.1016/j.tet.2004.02.013
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title = "Synthesis of extended spacer-linked neooligodeoxysaccharides by metathesis olefination and evaluation of their RNA-binding properties",
abstract = "The preparation of linear 1,4-butanediol-linked oligodeoxysugars 50-53, 58 and 60 is described which are potential binders to polynucleotides. Various aminodeoxymonosaccharides 9, 13-18, 30, 31 and 40-42 which are either allylated at the anomeric center or at C4 were subjected to the metathesis olefination protocol. Depending on the position of allylation E/Z-mixtures of C 2-symmetric head-to-head or tail-to-tail homodimers were formed. Among them, saccharides 13, 30, 31 and 40 were transformed into the corresponding 1,4-butanediol linked disaccharides 50-53 by catalytic hydrogenation of the central olefinic double bond and exhaustive deprotection. In order to target extended spacer-linked neooligosaccharides homodimeric aminoglycoside 37 was bisallylated and subjected to cross metathesis conditions using methyl 4-O-allyl daunosamide 40 as reaction partner which yielded two desired trimeric and tetrameric linearly spacer-linked daunosamine derivatives. After hydrogenation and deprotection two additional probes 58 and 60 for nucleic acid binding studies were at hand.",
keywords = "Aminoglycosides, Carbohydrates, Metathesis, Olefination, Rearrangement, RNA-binding",
author = "Andreas Kirschning and Chen, {Guang Wu} and Janis Jaunzems and Martin Jesberger and Markus Kalesse and Meike Lindner",
note = "Funding information: This work was supported by the Deutsche Forschungsgemeinschaft (SFB 416, project B2 and KA 913/6-1) and by the Fonds der Chemischen Industrie. This project is part of the joint initiative {\textquoteleft}Biologisch aktive Naturstoffe-Synthetische Diversit{\"a}t{\textquoteright} at the University of Hannover. We thank Dmitri Kashin for preparative assistance.",
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T1 - Synthesis of extended spacer-linked neooligodeoxysaccharides by metathesis olefination and evaluation of their RNA-binding properties

AU - Kirschning, Andreas

AU - Chen, Guang Wu

AU - Jaunzems, Janis

AU - Jesberger, Martin

AU - Kalesse, Markus

AU - Lindner, Meike

N1 - Funding information: This work was supported by the Deutsche Forschungsgemeinschaft (SFB 416, project B2 and KA 913/6-1) and by the Fonds der Chemischen Industrie. This project is part of the joint initiative ‘Biologisch aktive Naturstoffe-Synthetische Diversität’ at the University of Hannover. We thank Dmitri Kashin for preparative assistance.

PY - 2004/3/17

Y1 - 2004/3/17

N2 - The preparation of linear 1,4-butanediol-linked oligodeoxysugars 50-53, 58 and 60 is described which are potential binders to polynucleotides. Various aminodeoxymonosaccharides 9, 13-18, 30, 31 and 40-42 which are either allylated at the anomeric center or at C4 were subjected to the metathesis olefination protocol. Depending on the position of allylation E/Z-mixtures of C 2-symmetric head-to-head or tail-to-tail homodimers were formed. Among them, saccharides 13, 30, 31 and 40 were transformed into the corresponding 1,4-butanediol linked disaccharides 50-53 by catalytic hydrogenation of the central olefinic double bond and exhaustive deprotection. In order to target extended spacer-linked neooligosaccharides homodimeric aminoglycoside 37 was bisallylated and subjected to cross metathesis conditions using methyl 4-O-allyl daunosamide 40 as reaction partner which yielded two desired trimeric and tetrameric linearly spacer-linked daunosamine derivatives. After hydrogenation and deprotection two additional probes 58 and 60 for nucleic acid binding studies were at hand.

AB - The preparation of linear 1,4-butanediol-linked oligodeoxysugars 50-53, 58 and 60 is described which are potential binders to polynucleotides. Various aminodeoxymonosaccharides 9, 13-18, 30, 31 and 40-42 which are either allylated at the anomeric center or at C4 were subjected to the metathesis olefination protocol. Depending on the position of allylation E/Z-mixtures of C 2-symmetric head-to-head or tail-to-tail homodimers were formed. Among them, saccharides 13, 30, 31 and 40 were transformed into the corresponding 1,4-butanediol linked disaccharides 50-53 by catalytic hydrogenation of the central olefinic double bond and exhaustive deprotection. In order to target extended spacer-linked neooligosaccharides homodimeric aminoglycoside 37 was bisallylated and subjected to cross metathesis conditions using methyl 4-O-allyl daunosamide 40 as reaction partner which yielded two desired trimeric and tetrameric linearly spacer-linked daunosamine derivatives. After hydrogenation and deprotection two additional probes 58 and 60 for nucleic acid binding studies were at hand.

KW - Aminoglycosides

KW - Carbohydrates

KW - Metathesis

KW - Olefination

KW - Rearrangement

KW - RNA-binding

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U2 - 10.1016/j.tet.2004.02.013

DO - 10.1016/j.tet.2004.02.013

M3 - Article

AN - SCOPUS:1642410821

VL - 60

SP - 3505

EP - 3521

JO - Tetrahedron

JF - Tetrahedron

SN - 0040-4020

IS - 15

ER -

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