Mating biology, nuclear DNA content and genetic diversity in spider plant (Cleome gynandra) germplasm from various African countries

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

Autoren

Externe Organisationen

  • Jomo Kenyatta University of Agriculture and Technology
  • AVRDC - The World Vegetable Center
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Details

OriginalspracheEnglisch
Seiten (von - bis)578-589
Seitenumfang12
FachzeitschriftPlant Breeding
Jahrgang136
Ausgabenummer4
Frühes Online-Datum26 Mai 2017
PublikationsstatusVeröffentlicht - Aug. 2017

Abstract

Cleome gynandra (L.) Briq. is an African leafy vegetable with a potential to improve food security and micronutrient deficiencies. Cytological traits, breeding biology and genetic diversity of 30 selected entries of C. gynandra from six African countries were investigated. The entries consisted of advanced lines, gene bank accessions and farmers’ cultivars. Our study revealed chromosome numbers of 2n = 34 in root tip metaphase cells from one entry. The 30 entries were found to be diploid with genome sizes ranging from 2.31 to 2.45 pg/2C. Hand pollination experiments were carried out to assess self-incompatibility within the entries and revealed that they are self- and cross-compatible. For genetic diversity studies within and among the entries, the pooled data of 499 polymorphic bands from 11 amplified fragment length polymorphism primer combinations and nine simple sequence repeat markers were used. The genetic distance among the entries ranged from 0.13 to 0.77. In a principal coordinate analysis, the farmers’ cultivars formed a cluster separate from the advanced lines and the gene bank entries, and the latter were not well resolved.

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Mating biology, nuclear DNA content and genetic diversity in spider plant (Cleome gynandra) germplasm from various African countries. / Omondi, Emmanuel O.; Debener, Thomas; Linde, Marcus et al.
in: Plant Breeding, Jahrgang 136, Nr. 4, 08.2017, S. 578-589.

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

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title = "Mating biology, nuclear DNA content and genetic diversity in spider plant (Cleome gynandra) germplasm from various African countries",
abstract = "Cleome gynandra (L.) Briq. is an African leafy vegetable with a potential to improve food security and micronutrient deficiencies. Cytological traits, breeding biology and genetic diversity of 30 selected entries of C. gynandra from six African countries were investigated. The entries consisted of advanced lines, gene bank accessions and farmers{\textquoteright} cultivars. Our study revealed chromosome numbers of 2n = 34 in root tip metaphase cells from one entry. The 30 entries were found to be diploid with genome sizes ranging from 2.31 to 2.45 pg/2C. Hand pollination experiments were carried out to assess self-incompatibility within the entries and revealed that they are self- and cross-compatible. For genetic diversity studies within and among the entries, the pooled data of 499 polymorphic bands from 11 amplified fragment length polymorphism primer combinations and nine simple sequence repeat markers were used. The genetic distance among the entries ranged from 0.13 to 0.77. In a principal coordinate analysis, the farmers{\textquoteright} cultivars formed a cluster separate from the advanced lines and the gene bank entries, and the latter were not well resolved.",
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author = "Omondi, {Emmanuel O.} and Thomas Debener and Marcus Linde and Mary Abukutsa-Onyango and Dinssa, {Fekadu F.} and Traud Winkelmann",
note = "Funding Information: The authors are grateful for the funding within the project HORTINLEA by the German Federal Ministry of Education and Research (BMBF) and the German Federal Ministry of Economic Cooperation and Development (BMZ) within the framework of the GlobE-Global Food Security. The authors thank Diro Terefe for assisting in SSR marker designing, David Odongo for farmer's cultivar collection and WorldVeg for supplying plant material. Publisher Copyright: {\textcopyright} 2017 Blackwell Verlag GmbH Copyright: Copyright 2017 Elsevier B.V., All rights reserved.",
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AU - Dinssa, Fekadu F.

AU - Winkelmann, Traud

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PY - 2017/8

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N2 - Cleome gynandra (L.) Briq. is an African leafy vegetable with a potential to improve food security and micronutrient deficiencies. Cytological traits, breeding biology and genetic diversity of 30 selected entries of C. gynandra from six African countries were investigated. The entries consisted of advanced lines, gene bank accessions and farmers’ cultivars. Our study revealed chromosome numbers of 2n = 34 in root tip metaphase cells from one entry. The 30 entries were found to be diploid with genome sizes ranging from 2.31 to 2.45 pg/2C. Hand pollination experiments were carried out to assess self-incompatibility within the entries and revealed that they are self- and cross-compatible. For genetic diversity studies within and among the entries, the pooled data of 499 polymorphic bands from 11 amplified fragment length polymorphism primer combinations and nine simple sequence repeat markers were used. The genetic distance among the entries ranged from 0.13 to 0.77. In a principal coordinate analysis, the farmers’ cultivars formed a cluster separate from the advanced lines and the gene bank entries, and the latter were not well resolved.

AB - Cleome gynandra (L.) Briq. is an African leafy vegetable with a potential to improve food security and micronutrient deficiencies. Cytological traits, breeding biology and genetic diversity of 30 selected entries of C. gynandra from six African countries were investigated. The entries consisted of advanced lines, gene bank accessions and farmers’ cultivars. Our study revealed chromosome numbers of 2n = 34 in root tip metaphase cells from one entry. The 30 entries were found to be diploid with genome sizes ranging from 2.31 to 2.45 pg/2C. Hand pollination experiments were carried out to assess self-incompatibility within the entries and revealed that they are self- and cross-compatible. For genetic diversity studies within and among the entries, the pooled data of 499 polymorphic bands from 11 amplified fragment length polymorphism primer combinations and nine simple sequence repeat markers were used. The genetic distance among the entries ranged from 0.13 to 0.77. In a principal coordinate analysis, the farmers’ cultivars formed a cluster separate from the advanced lines and the gene bank entries, and the latter were not well resolved.

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