Development of cleaved amplified polymorphic sequence (CAPS) markers that may indicate ethylene sensitivity in miniature potted roses

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandAufsatz in KonferenzbandForschungPeer-Review

Autoren

  • Mohammad Al-Salem
  • Margrethe Serek

Organisationseinheiten

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Details

OriginalspracheEnglisch
Titel des SammelwerksVI International Conference Postharvest Unlimited
Herausgeber/-innenD. Valero, M. Serrano, M. Gil
Herausgeber (Verlag)International Society for Horticultural Science
Seiten107-113
Seitenumfang7
ISBN (elektronisch)978-94-62612-53-2
PublikationsstatusVeröffentlicht - 8 Nov. 2019
VeranstaltungVI International Conference Postharvest Unlimited - Madrid, Spanien
Dauer: 17 Okt. 201720 Okt. 2017

Publikationsreihe

NameISHS Acta Horticulturae
Herausgeber (Verlag)International Society for Horticultural Science
Band1256
ISSN (Print)0567-7572
ISSN (elektronisch)2406-6168

Abstract

Improvement of quality and display life of miniature potted roses, Rosa hybrida L., is an important issue for rose breeders. Sensitivity to ethylene significantly influences the postproduction life of different cultivars. Availability of molecular markers that in the early growth stages can distinguish between rose cultivars with high or low ethylene sensitivity would therefore be valuable. Two tetraploid miniature potted cultivars, i.e., ‘Vanilla’ which is only slightly sensitive to ethylene and ‘Lavender’ which is very sensitive to ethylene, as well as four ‘Vanilla’ × ‘Lavender’ F1 progeny plants of low sensitivity and four of high sensitivity were investigated. The genes for the ethylene receptor RhETR3 and the transcription factor RhEIN3 were selected for development of cleaved amplified polymorphic sequence (CAPS) markers. Amplified fragments of RhETR3 and RhEIN3 cDNA of ‘Vanilla’ and ‘Lavender’ were cloned, sequenced and subjected to digestion with restriction enzymes with recognition sites containing SNPs detected by comparison of the sequences from ‘Vanilla’ and ‘Lavender’. Two slightly different alleles of each gene were identified for both ‘Vanilla’ and ‘Lavender’. The SNPs located in restriction enzyme sites lead to the expected differences in restriction fragment sizes between ‘Vanilla’ and ‘Lavender’ cDNAs, but the results for the F1 progeny plants are not correlated with their ethylene sensitivity. Since the plants are tetraploid, characterization of more alleles of the RhETR3 and RhEIN3 genes and more SNPs may be required to obtain a useful system of markers.

ASJC Scopus Sachgebiete

  • Agrar- und Biowissenschaften (insg.)
  • Gartenbau

Zitieren

Development of cleaved amplified polymorphic sequence (CAPS) markers that may indicate ethylene sensitivity in miniature potted roses. / Al-Salem, Mohammad; Serek, Margrethe.
VI International Conference Postharvest Unlimited. Hrsg. / D. Valero; M. Serrano; M. Gil. International Society for Horticultural Science, 2019. S. 107-113 (ISHS Acta Horticulturae; Band 1256).

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandAufsatz in KonferenzbandForschungPeer-Review

Al-Salem, M & Serek, M 2019, Development of cleaved amplified polymorphic sequence (CAPS) markers that may indicate ethylene sensitivity in miniature potted roses. in D Valero, M Serrano & M Gil (Hrsg.), VI International Conference Postharvest Unlimited. ISHS Acta Horticulturae, Bd. 1256, International Society for Horticultural Science, S. 107-113, VI International Conference Postharvest Unlimited, Madrid, Spanien, 17 Okt. 2017. https://doi.org/10.17660/ActaHortic.2019.1256.15
Al-Salem, M., & Serek, M. (2019). Development of cleaved amplified polymorphic sequence (CAPS) markers that may indicate ethylene sensitivity in miniature potted roses. In D. Valero, M. Serrano, & M. Gil (Hrsg.), VI International Conference Postharvest Unlimited (S. 107-113). (ISHS Acta Horticulturae; Band 1256). International Society for Horticultural Science. https://doi.org/10.17660/ActaHortic.2019.1256.15
Al-Salem M, Serek M. Development of cleaved amplified polymorphic sequence (CAPS) markers that may indicate ethylene sensitivity in miniature potted roses. in Valero D, Serrano M, Gil M, Hrsg., VI International Conference Postharvest Unlimited. International Society for Horticultural Science. 2019. S. 107-113. (ISHS Acta Horticulturae). doi: 10.17660/ActaHortic.2019.1256.15
Al-Salem, Mohammad ; Serek, Margrethe. / Development of cleaved amplified polymorphic sequence (CAPS) markers that may indicate ethylene sensitivity in miniature potted roses. VI International Conference Postharvest Unlimited. Hrsg. / D. Valero ; M. Serrano ; M. Gil. International Society for Horticultural Science, 2019. S. 107-113 (ISHS Acta Horticulturae).
Download
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title = "Development of cleaved amplified polymorphic sequence (CAPS) markers that may indicate ethylene sensitivity in miniature potted roses",
abstract = "Improvement of quality and display life of miniature potted roses, Rosa hybrida L., is an important issue for rose breeders. Sensitivity to ethylene significantly influences the postproduction life of different cultivars. Availability of molecular markers that in the early growth stages can distinguish between rose cultivars with high or low ethylene sensitivity would therefore be valuable. Two tetraploid miniature potted cultivars, i.e., {\textquoteleft}Vanilla{\textquoteright} which is only slightly sensitive to ethylene and {\textquoteleft}Lavender{\textquoteright} which is very sensitive to ethylene, as well as four {\textquoteleft}Vanilla{\textquoteright} × {\textquoteleft}Lavender{\textquoteright} F1 progeny plants of low sensitivity and four of high sensitivity were investigated. The genes for the ethylene receptor RhETR3 and the transcription factor RhEIN3 were selected for development of cleaved amplified polymorphic sequence (CAPS) markers. Amplified fragments of RhETR3 and RhEIN3 cDNA of {\textquoteleft}Vanilla{\textquoteright} and {\textquoteleft}Lavender{\textquoteright} were cloned, sequenced and subjected to digestion with restriction enzymes with recognition sites containing SNPs detected by comparison of the sequences from {\textquoteleft}Vanilla{\textquoteright} and {\textquoteleft}Lavender{\textquoteright}. Two slightly different alleles of each gene were identified for both {\textquoteleft}Vanilla{\textquoteright} and {\textquoteleft}Lavender{\textquoteright}. The SNPs located in restriction enzyme sites lead to the expected differences in restriction fragment sizes between {\textquoteleft}Vanilla{\textquoteright} and {\textquoteleft}Lavender{\textquoteright} cDNAs, but the results for the F1 progeny plants are not correlated with their ethylene sensitivity. Since the plants are tetraploid, characterization of more alleles of the RhETR3 and RhEIN3 genes and more SNPs may be required to obtain a useful system of markers.",
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Download

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AU - Al-Salem, Mohammad

AU - Serek, Margrethe

N1 - Funding information: The experimental work was partly supported by a Ph.D. grant from the German Academic Exchange Service (DAAD) (Ref.: 412, PKZ: A/03/33925). The authors would like to thank Prof. em. Bjarne M. Stummann (University of Copenhagen, Denmark) for valuable advices and critical review of the manuscript, and to thank the technical and scientific staff from the Section of Floriculture at Leibniz University of Hannover for fruitful discussions and technical assistance.

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N2 - Improvement of quality and display life of miniature potted roses, Rosa hybrida L., is an important issue for rose breeders. Sensitivity to ethylene significantly influences the postproduction life of different cultivars. Availability of molecular markers that in the early growth stages can distinguish between rose cultivars with high or low ethylene sensitivity would therefore be valuable. Two tetraploid miniature potted cultivars, i.e., ‘Vanilla’ which is only slightly sensitive to ethylene and ‘Lavender’ which is very sensitive to ethylene, as well as four ‘Vanilla’ × ‘Lavender’ F1 progeny plants of low sensitivity and four of high sensitivity were investigated. The genes for the ethylene receptor RhETR3 and the transcription factor RhEIN3 were selected for development of cleaved amplified polymorphic sequence (CAPS) markers. Amplified fragments of RhETR3 and RhEIN3 cDNA of ‘Vanilla’ and ‘Lavender’ were cloned, sequenced and subjected to digestion with restriction enzymes with recognition sites containing SNPs detected by comparison of the sequences from ‘Vanilla’ and ‘Lavender’. Two slightly different alleles of each gene were identified for both ‘Vanilla’ and ‘Lavender’. The SNPs located in restriction enzyme sites lead to the expected differences in restriction fragment sizes between ‘Vanilla’ and ‘Lavender’ cDNAs, but the results for the F1 progeny plants are not correlated with their ethylene sensitivity. Since the plants are tetraploid, characterization of more alleles of the RhETR3 and RhEIN3 genes and more SNPs may be required to obtain a useful system of markers.

AB - Improvement of quality and display life of miniature potted roses, Rosa hybrida L., is an important issue for rose breeders. Sensitivity to ethylene significantly influences the postproduction life of different cultivars. Availability of molecular markers that in the early growth stages can distinguish between rose cultivars with high or low ethylene sensitivity would therefore be valuable. Two tetraploid miniature potted cultivars, i.e., ‘Vanilla’ which is only slightly sensitive to ethylene and ‘Lavender’ which is very sensitive to ethylene, as well as four ‘Vanilla’ × ‘Lavender’ F1 progeny plants of low sensitivity and four of high sensitivity were investigated. The genes for the ethylene receptor RhETR3 and the transcription factor RhEIN3 were selected for development of cleaved amplified polymorphic sequence (CAPS) markers. Amplified fragments of RhETR3 and RhEIN3 cDNA of ‘Vanilla’ and ‘Lavender’ were cloned, sequenced and subjected to digestion with restriction enzymes with recognition sites containing SNPs detected by comparison of the sequences from ‘Vanilla’ and ‘Lavender’. Two slightly different alleles of each gene were identified for both ‘Vanilla’ and ‘Lavender’. The SNPs located in restriction enzyme sites lead to the expected differences in restriction fragment sizes between ‘Vanilla’ and ‘Lavender’ cDNAs, but the results for the F1 progeny plants are not correlated with their ethylene sensitivity. Since the plants are tetraploid, characterization of more alleles of the RhETR3 and RhEIN3 genes and more SNPs may be required to obtain a useful system of markers.

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