Comparative genomic analysis of sequences around the Rdr1 locus in resistant and susceptible rose genotypes

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandBeitrag in Buch/SammelwerkForschungPeer-Review

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OriginalspracheEnglisch
Titel des SammelwerksActa Horticulturae
Herausgeber (Verlag)International Society for Horticultural Science
Seiten197-204
Seitenumfang8
ISBN (Print)9789066054899
PublikationsstatusVeröffentlicht - 31 Juli 2010

Publikationsreihe

NameActa Horticulturae
Band870
ISSN (Print)0567-7572

Abstract

Sequence analysis of the locus carrying the Rdr1 gene conferring resistance to the black spot disease in roses was conducted. A 204-b and 249-b sequence from the resistant Rosa multiflora and susceptible Rosa rugosa loci, respectively, were compared to understand the mechanism involved in the diversification of the Rdr1 gene cluster. Sequence similarity between the nine Rdr1 paralogues of R. multiflora and 11 orthologues of R. rugosa up to 99% was observed. In some cases the similarity was higher among the Rdr1 orthologues than among the paralogues.Recombination, gene conversion and point mutation events were detected within the Rdr1 orthologues. The analysis showed that similar R gene diversifying mechanisms would take place in woody perennial rose plants as already indicated for herbaceous annuals. In relation to the R genes in annual plants, recent duplications might have generated the Rdr1 gene cluster in rose plants.

ASJC Scopus Sachgebiete

  • Agrar- und Biowissenschaften (insg.)
  • Gartenbau

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Comparative genomic analysis of sequences around the Rdr1 locus in resistant and susceptible rose genotypes. / Terefe, D.; Biber, A.; Yasmin, A. et al.
Acta Horticulturae. International Society for Horticultural Science, 2010. S. 197-204 (Acta Horticulturae; Band 870).

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandBeitrag in Buch/SammelwerkForschungPeer-Review

Terefe, D, Biber, A, Yasmin, A, Kaufmann, H & Debener, T 2010, Comparative genomic analysis of sequences around the Rdr1 locus in resistant and susceptible rose genotypes. in Acta Horticulturae. Acta Horticulturae, Bd. 870, International Society for Horticultural Science, S. 197-204. https://doi.org/10.17660/ActaHortic.2010.870.26
Terefe, D., Biber, A., Yasmin, A., Kaufmann, H., & Debener, T. (2010). Comparative genomic analysis of sequences around the Rdr1 locus in resistant and susceptible rose genotypes. In Acta Horticulturae (S. 197-204). (Acta Horticulturae; Band 870). International Society for Horticultural Science. https://doi.org/10.17660/ActaHortic.2010.870.26
Terefe D, Biber A, Yasmin A, Kaufmann H, Debener T. Comparative genomic analysis of sequences around the Rdr1 locus in resistant and susceptible rose genotypes. in Acta Horticulturae. International Society for Horticultural Science. 2010. S. 197-204. (Acta Horticulturae). doi: 10.17660/ActaHortic.2010.870.26
Terefe, D. ; Biber, A. ; Yasmin, A. et al. / Comparative genomic analysis of sequences around the Rdr1 locus in resistant and susceptible rose genotypes. Acta Horticulturae. International Society for Horticultural Science, 2010. S. 197-204 (Acta Horticulturae).
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AU - Debener, T.

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KW - Diversity

KW - Duplication

KW - Herbaceous annual

KW - Recombination

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