BioNex: A System For Biomedical News Event Exploration

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandAufsatz in KonferenzbandForschungPeer-Review

Autoren

  • Patrick Ernst
  • Arunav Mishra
  • Avishek Anand
  • Vinay Setty

Organisationseinheiten

Externe Organisationen

  • Max-Planck-Institut für Informatik
  • Aalborg University
Forschungs-netzwerk anzeigen

Details

OriginalspracheEnglisch
Titel des SammelwerksSIGIR 2017 - Proceedings of the 40th International ACM SIGIR Conference on Research and Development in Information Retrieval
Herausgeber (Verlag)Association for Computing Machinery (ACM)
Seiten1277-1280
Seitenumfang4
ISBN (elektronisch)9781450350228
PublikationsstatusVeröffentlicht - 2017
Veranstaltung40th International ACM SIGIR Conference on Research and Development in Information Retrieval, SIGIR 2017 - Tokyo, Shinjuku, Japan
Dauer: 7 Aug. 201711 Aug. 2017

Abstract

We demonstrate BioNex, a system to mine, rank and visualize biomedical news events. BioNex takes biomedical queries such as "Ebola virus disease" and retrieves the k most relevant news events for them. To achieve this we first mine the generic news events by clustering them on a daily basis using general named entities and textual features. These clusters are also tagged with disambiguated biomedical entities which aid in biomedical news event exploration. These clusters are then used to compute the importance scores for the event clusters based on a combination of textual, semantic, popularity and historical importance features. BioNex also visualizes the retrieved event clusters to highlight the top news events and corresponding news articles for the given query. The visualization also provides the context for news events using (1) a chain of historically relevant news event clusters, and (2) other non-biomedical events from the same day.

ASJC Scopus Sachgebiete

Ziele für nachhaltige Entwicklung

Zitieren

BioNex: A System For Biomedical News Event Exploration. / Ernst, Patrick; Mishra, Arunav; Anand, Avishek et al.
SIGIR 2017 - Proceedings of the 40th International ACM SIGIR Conference on Research and Development in Information Retrieval. Association for Computing Machinery (ACM), 2017. S. 1277-1280.

Publikation: Beitrag in Buch/Bericht/Sammelwerk/KonferenzbandAufsatz in KonferenzbandForschungPeer-Review

Ernst, P, Mishra, A, Anand, A & Setty, V 2017, BioNex: A System For Biomedical News Event Exploration. in SIGIR 2017 - Proceedings of the 40th International ACM SIGIR Conference on Research and Development in Information Retrieval. Association for Computing Machinery (ACM), S. 1277-1280, 40th International ACM SIGIR Conference on Research and Development in Information Retrieval, SIGIR 2017, Tokyo, Shinjuku, Japan, 7 Aug. 2017. https://doi.org/10.1145/3077136.3084150
Ernst, P., Mishra, A., Anand, A., & Setty, V. (2017). BioNex: A System For Biomedical News Event Exploration. In SIGIR 2017 - Proceedings of the 40th International ACM SIGIR Conference on Research and Development in Information Retrieval (S. 1277-1280). Association for Computing Machinery (ACM). https://doi.org/10.1145/3077136.3084150
Ernst P, Mishra A, Anand A, Setty V. BioNex: A System For Biomedical News Event Exploration. in SIGIR 2017 - Proceedings of the 40th International ACM SIGIR Conference on Research and Development in Information Retrieval. Association for Computing Machinery (ACM). 2017. S. 1277-1280 doi: 10.1145/3077136.3084150
Ernst, Patrick ; Mishra, Arunav ; Anand, Avishek et al. / BioNex: A System For Biomedical News Event Exploration. SIGIR 2017 - Proceedings of the 40th International ACM SIGIR Conference on Research and Development in Information Retrieval. Association for Computing Machinery (ACM), 2017. S. 1277-1280
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title = "BioNex: A System For Biomedical News Event Exploration",
abstract = "We demonstrate BioNex, a system to mine, rank and visualize biomedical news events. BioNex takes biomedical queries such as {"}Ebola virus disease{"} and retrieves the k most relevant news events for them. To achieve this we first mine the generic news events by clustering them on a daily basis using general named entities and textual features. These clusters are also tagged with disambiguated biomedical entities which aid in biomedical news event exploration. These clusters are then used to compute the importance scores for the event clusters based on a combination of textual, semantic, popularity and historical importance features. BioNex also visualizes the retrieved event clusters to highlight the top news events and corresponding news articles for the given query. The visualization also provides the context for news events using (1) a chain of historically relevant news event clusters, and (2) other non-biomedical events from the same day.",
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author = "Patrick Ernst and Arunav Mishra and Avishek Anand and Vinay Setty",
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Download

TY - GEN

T1 - BioNex: A System For Biomedical News Event Exploration

AU - Ernst, Patrick

AU - Mishra, Arunav

AU - Anand, Avishek

AU - Setty, Vinay

N1 - Funding information: Œis research was partially funded by the Danish Council for Independent Research under grant agreement DFF-4093-00301.

PY - 2017

Y1 - 2017

N2 - We demonstrate BioNex, a system to mine, rank and visualize biomedical news events. BioNex takes biomedical queries such as "Ebola virus disease" and retrieves the k most relevant news events for them. To achieve this we first mine the generic news events by clustering them on a daily basis using general named entities and textual features. These clusters are also tagged with disambiguated biomedical entities which aid in biomedical news event exploration. These clusters are then used to compute the importance scores for the event clusters based on a combination of textual, semantic, popularity and historical importance features. BioNex also visualizes the retrieved event clusters to highlight the top news events and corresponding news articles for the given query. The visualization also provides the context for news events using (1) a chain of historically relevant news event clusters, and (2) other non-biomedical events from the same day.

AB - We demonstrate BioNex, a system to mine, rank and visualize biomedical news events. BioNex takes biomedical queries such as "Ebola virus disease" and retrieves the k most relevant news events for them. To achieve this we first mine the generic news events by clustering them on a daily basis using general named entities and textual features. These clusters are also tagged with disambiguated biomedical entities which aid in biomedical news event exploration. These clusters are then used to compute the importance scores for the event clusters based on a combination of textual, semantic, popularity and historical importance features. BioNex also visualizes the retrieved event clusters to highlight the top news events and corresponding news articles for the given query. The visualization also provides the context for news events using (1) a chain of historically relevant news event clusters, and (2) other non-biomedical events from the same day.

KW - Biological Event Exploration

KW - Biomedical Entities

KW - Event Clustering

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