Ab-Initio Molecular Dynamics Simulation of Condensed-Phase Reactivity: The Electrolysis of Amino Acids and Peptides

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

Autoren

  • Ali Kiakojouri
  • Ebrahim Nadimi
  • Irmgard Frank

Externe Organisationen

  • K.N. Toosi University of Technology
Forschungs-netzwerk anzeigen

Details

OriginalspracheEnglisch
Aufsatznummer5415
FachzeitschriftMolecules (Basel, Switzerland)
Jahrgang25
Ausgabenummer22
PublikationsstatusVeröffentlicht - 19 Nov. 2020

Abstract

Electrolysis is a potential candidate for a quick method of wastewater cleansing. However, it is necessary to know what compounds might be formed from bioorganic matter. We want to know if there are toxic intermediates and if it is possible to influence the product formation by the variation in initial conditions. In the present study, we use Car-Parrinello molecular dynamics to simulate the fastest reaction steps under such circumstances. We investigate the behavior of amino acids and peptides under anodic conditions. Such highly reactive situations lead to chemical reactions within picoseconds, and we can model the reaction mechanisms in full detail. The role of the electric current is to discharge charged species and, hence, to produce radicals from ions. This leads to ultra-fast radical reactions in a bulk environment, which can also be seen as redox reactions as the oxidation states change. In the case of amino acids, the educts can be zwitterionic, so we also observe complex acid-base chemistry. Hence, we obtain the full spectrum of condensed-phase chemistry.

ASJC Scopus Sachgebiete

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Ab-Initio Molecular Dynamics Simulation of Condensed-Phase Reactivity: The Electrolysis of Amino Acids and Peptides. / Kiakojouri, Ali; Nadimi, Ebrahim; Frank, Irmgard.
in: Molecules (Basel, Switzerland), Jahrgang 25, Nr. 22, 5415, 19.11.2020.

Publikation: Beitrag in FachzeitschriftArtikelForschungPeer-Review

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N1 - Funding Information: The study was supported by the Deutsche Forschungsgemeinschaft (DFG), grant FR1246/10-1. Part of the calculations were performed on the local cluster of the Leibniz University of Hannover at the RRZN and on the Hochstleistungsrechner Nord, HLRN, maintained by the North German Supercomputing Alliance, project nic00061.

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